.gitignore
.pre-commit-config.yaml
.readthedocs.yml
Dockerfile
LICENSE
MANIFEST.in
README.md
pyproject.toml
requirements-min.txt
requirements.txt
setup.cfg
setup.py
.github/codecov.yml
.github/env.yml
.github/workflows/testing.yml
classrad/README.md
classrad/__init__.py
classrad/get_maps.py
classrad.egg-info/PKG-INFO
classrad.egg-info/SOURCES.txt
classrad.egg-info/dependency_links.txt
classrad.egg-info/requires.txt
classrad.egg-info/top_level.txt
classrad/config/__init__.py
classrad/config/config.py
classrad/config/pyradiomics_feature_names.json
classrad/config/pyradiomics_params/Baessler_CT.yaml
classrad/config/pyradiomics_params/default_feature_map.yaml
classrad/data/__init__.py
classrad/data/dataset.py
classrad/evaluation/__init__.py
classrad/evaluation/evaluator.py
classrad/evaluation/evaluator_nnunet.py
classrad/evaluation/metrics.py
classrad/evaluation/utils.py
classrad/feature_extraction/__init__.py
classrad/feature_extraction/distance_extractor.py
classrad/feature_extraction/extractor.py
classrad/feature_selection/__init__.py
classrad/feature_selection/feature_selector.py
classrad/maps/__init__.py
classrad/maps/get_maps.py
classrad/maps/radiomics_params.yaml
classrad/maps/utils.py
classrad/maps/utils_2.py
classrad/models/__init__.py
classrad/models/classifier.py
classrad/registration/__init__.py
classrad/registration/notes.txt
classrad/segmentation/__init__.py
classrad/segmentation/utils.py
classrad/training/__init__.py
classrad/training/trainer.py
classrad/utils/__init__.py
classrad/utils/io.py
classrad/utils/preprocessing.py
classrad/utils/splitting.py
classrad/utils/statistics.py
classrad/utils/utils.py
classrad/utils/visualization.py
docs/segmentation.md
docs/images/logo.png
docs/images/logo_white.png
docs/images/logo_white_small.png
tests/classrad/test_dataset.py
tests/classrad/test_utils.py
tests/testing_data/DICOM/DWI.dcm
tests/testing_data/DICOM/CT_head/CTHead1.dcm
tests/testing_data/DICOM/CT_head/CTHead10.dcm
tests/testing_data/DICOM/CT_head/CTHead11.dcm
tests/testing_data/DICOM/CT_head/CTHead12.dcm
tests/testing_data/DICOM/CT_head/CTHead13.dcm
tests/testing_data/DICOM/CT_head/CTHead14.dcm
tests/testing_data/DICOM/CT_head/CTHead15.dcm
tests/testing_data/DICOM/CT_head/CTHead16.dcm
tests/testing_data/DICOM/CT_head/CTHead17.dcm
tests/testing_data/DICOM/CT_head/CTHead18.dcm
tests/testing_data/DICOM/CT_head/CTHead19.dcm
tests/testing_data/DICOM/CT_head/CTHead2.dcm
tests/testing_data/DICOM/CT_head/CTHead20.dcm
tests/testing_data/DICOM/CT_head/CTHead21.dcm
tests/testing_data/DICOM/CT_head/CTHead22.dcm
tests/testing_data/DICOM/CT_head/CTHead23.dcm
tests/testing_data/DICOM/CT_head/CTHead24.dcm
tests/testing_data/DICOM/CT_head/CTHead25.dcm
tests/testing_data/DICOM/CT_head/CTHead26.dcm
tests/testing_data/DICOM/CT_head/CTHead27.dcm
tests/testing_data/DICOM/CT_head/CTHead28.dcm
tests/testing_data/DICOM/CT_head/CTHead29.dcm
tests/testing_data/DICOM/CT_head/CTHead3.dcm
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tests/testing_data/DICOM/CT_head/CTHead31.dcm
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tests/testing_data/DICOM/CT_head/CTHead4.dcm
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tests/testing_data/DICOM/CT_head/CTHead46.dcm
tests/testing_data/DICOM/CT_head/CTHead47.dcm
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tests/testing_data/DICOM/CT_head/CTHead58.dcm
tests/testing_data/DICOM/CT_head/CTHead59.dcm
tests/testing_data/DICOM/CT_head/CTHead6.dcm
tests/testing_data/DICOM/CT_head/CTHead60.dcm
tests/testing_data/DICOM/CT_head/CTHead61.dcm
tests/testing_data/DICOM/CT_head/CTHead62.dcm
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tests/testing_data/DICOM/CT_head/CTHead69.dcm
tests/testing_data/DICOM/CT_head/CTHead7.dcm
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tests/testing_data/DICOM/CT_head/CTHead92.dcm
tests/testing_data/DICOM/CT_head/CTHead93.dcm
tests/testing_data/nifti/img.nii.gz
tests/testing_data/nifti/seg_empty.nii.gz
tests/testing_data/nifti/seg_multilabel.nii.gz
tests/testing_data/nifti/seg_multilabel.nrrd
tests/testing_data/nifti/seg_one_label.nii.gz
tests/testing_data/nifti/seg_single_slice.nii.gz
webapp/__init__.py
webapp/app.py
webapp/docker-compose.yml
webapp/extractor.py
webapp/paths_example.csv
webapp/template_utils.py
webapp/utils.py
webapp/templates/Binary classification/0. Preprocessing.py
webapp/templates/Binary classification/1. Feature extraction.py
webapp/templates/Binary classification/2. Training.py
webapp/templates/Binary classification/3. Evaluation.py
webapp/templates/Radiomics maps/Create maps.py
webapp/templates/Segmentation/Generate code for nnUNet.py