AUTHORS.rst
CONTRIBUTING.rst
HISTORY.rst
LICENSE
MANIFEST.in
README.md
setup.cfg
setup.py
ScanCE/Scan_ce_loose.py
ScanCE/Scan_ce_strict.py
ScanCE/__init__.py
ScanCE/__main__.py
ScanCE.egg-info/PKG-INFO
ScanCE.egg-info/SOURCES.txt
ScanCE.egg-info/dependency_links.txt
ScanCE.egg-info/entry_points.txt
ScanCE.egg-info/not-zip-safe
ScanCE.egg-info/requires.txt
ScanCE.egg-info/top_level.txt
docs/Makefile
docs/authors.rst
docs/conf.py
docs/contributing.rst
docs/history.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/readme.rst
docs/usage.rst
tests/GRCh38_latest_genomic.sorted_chr21.gff.gz
tests/GRCh38_latest_genomic.sorted_chr21.gff.gz.tbi
tests/LNCaP_CCLE_chr21_test.bam
tests/LNCaP_CCLE_chr21_test.bam.bai
tests/LNCaP_CCLE_chr21_test.loose.ce
tests/LNCaP_CCLE_chr21_test.strict.ce
tests/gencode.v38.annotation_sorted_chr21.gtf.gz
tests/gencode.v38.annotation_sorted_chr21.gtf.gz.tbi
tests/test_Scan_ce_loose.py
tests/test_Scan_ce_strict.py