LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
assets/dimensionality_reduction_comparison.png
examples/data/horse.csv
js/.eslintignore
js/.eslintrc.js
js/.prettierignore
js/.prettierrc
js/README.md
js/install.json
js/package-lock.json
js/package.json
js/tsconfig.json
js/webpack.config.js
js/lib/index.d.ts
js/lib/layout.worker.worker.js
js/lib/neighbour.worker.worker.js
js/lib/plugin.d.ts
js/lib/plugin.js
js/lib/plugin.js.LICENSE.txt
js/lib/version.d.ts
js/lib/widget.d.ts
js/src/App.svelte
js/src/index.ts
js/src/plugin.ts
js/src/version.ts
js/src/widget.ts
js/src/assets/flexbox-shrink-patch.css
js/src/assets/images/edge.png
js/src/assets/images/layout.png
js/src/assets/images/node.png
js/src/components/EncodingLayer.svelte
js/src/components/NeighbourMap.svelte
js/src/components/PixiLayer.svelte
js/src/components/legends/ColorLegend.svelte
js/src/components/legends/LegendsLayer.svelte
js/src/components/legends/SizeLegends.svelte
js/src/components/legends/Swatches.svelte
js/src/components/mapping/EdgeMapping.svelte
js/src/components/mapping/LayoutSimulation.svelte
js/src/components/mapping/MenuLayer.svelte
js/src/components/mapping/NodeMapping.svelte
js/src/components/network/EdgesLayer.svelte
js/src/components/network/Node.svelte
js/src/components/network/NodesLayer.svelte
js/src/components/network/PixiLasso.svelte
js/src/components/network/ProgressBar.svelte
js/src/components/network/pixiLasso.svelte
js/src/util/PixiKeyboard.js
js/src/util/colors.js
js/src/util/stores.js
js/src/util/worker.js
js/src/workers/layout.worker.js
js/src/workers/neighbour.worker.js
pySTAD.egg-info/PKG-INFO
pySTAD.egg-info/SOURCES.txt
pySTAD.egg-info/dependency_links.txt
pySTAD.egg-info/entry_points.txt
pySTAD.egg-info/not-zip-safe
pySTAD.egg-info/requires.txt
pySTAD.egg-info/top_level.txt
stad/__init__.py
stad/__main__.py
stad/_parameters.pxi
stad/stad.py
stad/_validation/__init__.py
stad/_validation/_assert.py
stad/_validation/distances.py
stad/_validation/distances_dense.py
stad/_validation/export.py
stad/_validation/network.py
stad/export/__init__.py
stad/export/_to_dict.py
stad/export/to_gexf.py
stad/export/to_igraph.py
stad/export/to_json.py
stad/export/to_networkx.py
stad/lens/Lens.py
stad/lens/__init__.py
stad/lenses/__init__.py
stad/lenses/_gauss_similarity.py
stad/lenses/_hop_k_approximation.py
stad/lenses/_inverse_similarity.py
stad/lenses/_k_min.py
stad/lenses/_linear_similarity.py
stad/lenses/boundary_coefficient.py
stad/lenses/density.py
stad/lenses/distance_to_measure.py
stad/lenses/eccentricity.py
stad/lenses/graph_laplacian.py
stad/lenses/graph_laplacian_alt.py
stad/lenses/knn_distance.py
stad/masks/__init__.py
stad/masks/distances.py
stad/masks/edges.py
stad/masks/mst.py
stad/objective/__init__.py
stad/objective/objective.py
stad/objective/_impl_fast/__init__.py
stad/objective/_impl_fast/network_distances.c
stad/objective/_impl_fast/network_distances.pyx
stad/objective/_impl_slow/__init__.py
stad/objective/_impl_slow/network_distances.py
stad/plot/__init__.py
stad/plot/network.py
stad/plot/sweep.py
stad/plot/traces.py
stad/sparse/__init__.py
stad/sparse/filter.py
stad/sparse/from_condensed.py
stad/sparse/is_in.py
stad/sparse/network_join.py
stad/sparse/squareform.py
stad/sparse/triu.py
stad/sparse/_impl_fast/__init__.py
stad/sparse/_impl_fast/_is_in.c
stad/sparse/_impl_fast/_is_in.pyx
stad/sparse/_impl_fast/_triu_cols.c
stad/sparse/_impl_fast/_triu_cols.pyx
stad/sparse/_impl_fast/_triu_rows.c
stad/sparse/_impl_fast/_triu_rows.pyx
stad/sparse/_impl_fast/ind2sub.c
stad/sparse/_impl_fast/ind2sub.pyx
stad/sparse/_impl_fast/sub2ind.c
stad/sparse/_impl_fast/sub2ind.pyx
stad/sparse/_impl_slow/__init__.py
stad/sparse/_impl_slow/_is_in.py
stad/sparse/_impl_slow/_triu_cols.py
stad/sparse/_impl_slow/_triu_rows.py
stad/sparse/_impl_slow/ind2sub.py
stad/sparse/_impl_slow/sub2ind.py
stad/sweeps/OptimizerFunction.py
stad/sweeps/SweepDistanceLinear.py
stad/sweeps/SweepDistanceLogarithmic.py
stad/sweeps/SweepEdgesLinear.py
stad/sweeps/SweepEdgesLogarithmic.py
stad/sweeps/ThresholdDistance.py
stad/sweeps/ThresholdEdges.py
stad/sweeps/_SweepBase.py
stad/sweeps/__init__.py
stad/widget/__init__.py
stad/widget/widget.py
stad/widget/labextension/package.json
stad/widget/labextension/static/480.0e8d1ca16ca26e3f69e6.js
stad/widget/labextension/static/480.0e8d1ca16ca26e3f69e6.js.LICENSE.txt
stad/widget/labextension/static/remoteEntry.5491c993f5c3c033ea8b.js
stad/widget/labextension/static/style.js
tests/.coverage
tests/coverage.xml
tests/test_examples.py
tests/test_export.py
tests/test_lens.py
tests/test_lenses.py
tests/test_main.py
tests/test_masks.py
tests/test_objective.py
tests/test_plots.py
tests/test_sparse.py
tests/test_stad.py
tests/test_sweep.py
tests/test_validation.py
tests/test_widget.py
tests/assets/edge_attributes_correct_color.csv
tests/assets/edge_attributes_correct_full.csv
tests/assets/edge_attributes_correct_missing_edges.csv
tests/assets/edge_attributes_correct_other_column.csv
tests/assets/edge_attributes_correct_width.csv
tests/assets/edge_attributes_incorrect_missing_source.csv
tests/assets/edge_attributes_incorrect_missing_target.csv
tests/assets/horse_dists.csv
tests/assets/node_attributes_correct_color.csv
tests/assets/node_attributes_correct_filter.csv
tests/assets/node_attributes_correct_full.csv
tests/assets/node_attributes_correct_other_column.csv
tests/assets/node_attributes_correct_radius.csv
tests/assets/node_attributes_incorrect_full.csv