Metadata-Version: 2.1
Name: TripletVoting
Version: 1.2
Summary: The tripvote Python software
Home-page: https://github.com/uym2/tripVote
Author: uym2
Author-email: ceciliamaitouyen@gmail.com
License: UNKNOWN
Platform: UNKNOWN
Classifier: Environment :: Console
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU General Public License (GPL)
Classifier: Natural Language :: English
Classifier: Programming Language :: Python
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3
License-File: LICENSE
License-File: COPYING
License-File: COPYING.LESSER

This is an implementation of tripVote: complete a set of gene trees to maximize the quartet score. The core algorithm is the Maximum Triplet Rooting (MTR) problem: Root a tree T according to a reference tree R such that the triplet score of T and R is maximized. The algorithm and the code heavily depend on the tqDist software http://birc.au.dk/software/tqDist/. We would like to thank the authors for the code and algorithmic ideas.

