.gitignore
.readthedocs.yaml
LICENSE
README.md
pyproject.toml
setup.cfg
setup.py
.github/workflows/black.yml
.github/workflows/python_publish.yml
.github/workflows/tests.yml
demos/density_estimation_demo.ipynb
demos/gaussian_fitting_demo.ipynb
demos/gibbs_sampling_demo.ipynb
demos/gp_linear_inversion_demo.ipynb
demos/gp_optimisation_demo.ipynb
demos/gp_regression_demo.ipynb
demos/hamiltonian_mcmc_demo.ipynb
demos/parallel_tempering_demo.ipynb
demos/peak_fitting_demo.ipynb
demos/scripts/ChainPool_demo.py
demos/scripts/GaussianKDE_demo.py
demos/scripts/GibbsChain_demo.py
demos/scripts/GpOptimiser_demo.py
demos/scripts/HamiltonianChain_demo.py
demos/scripts/ParallelTempering_demo.py
demos/scripts/UnimodalPdf_demo.py
demos/scripts/gaussian_fitting_demo.py
demos/scripts/parameter_constraints_demo.py
demos/scripts/spectroscopy_demo.py
docs/Makefile
docs/make.bat
docs/source/EnsembleSampler.rst
docs/source/GibbsChain.rst
docs/source/GpLinearInverter.rst
docs/source/GpOptimiser.rst
docs/source/GpRegressor.rst
docs/source/HamiltonianChain.rst
docs/source/ParallelTempering.rst
docs/source/PcaChain.rst
docs/source/acquisition_functions.rst
docs/source/conf.py
docs/source/covariance_functions.rst
docs/source/distributions.rst
docs/source/getting_started.rst
docs/source/gp.rst
docs/source/index.rst
docs/source/likelihoods.rst
docs/source/mcmc.rst
docs/source/pdf.rst
docs/source/plotting.rst
docs/source/posterior.rst
docs/source/priors.rst
docs/source/images/GibbsChain_images/GibbsChain_image_production.py
docs/source/images/GibbsChain_images/burned_scatter.png
docs/source/images/GibbsChain_images/gibbs_diagnostics.png
docs/source/images/GibbsChain_images/gibbs_marginals.png
docs/source/images/GibbsChain_images/initial_scatter.png
docs/source/images/GpOptimiser_images/GpOptimiser_image_production.py
docs/source/images/GpOptimiser_images/GpOptimiser_iteration.gif
docs/source/images/GpRegressor_images/GpRegressor_image_production.py
docs/source/images/GpRegressor_images/gradient_prediction.png
docs/source/images/GpRegressor_images/posterior_samples.png
docs/source/images/GpRegressor_images/regression_estimate.png
docs/source/images/GpRegressor_images/sampled_data.png
docs/source/images/HamiltonianChain_images/HamiltonianChain_image_production.py
docs/source/images/HamiltonianChain_images/hmc_matrix_plot.png
docs/source/images/HamiltonianChain_images/hmc_scatterplot.html
docs/source/images/ParallelTempering_images/ParallelTempering_image_production.py
docs/source/images/ParallelTempering_images/parallel_tempering_matrix.png
docs/source/images/ParallelTempering_images/parallel_tempering_trace.png
docs/source/images/gallery_images/gallery_density_estimation.png
docs/source/images/gallery_images/gallery_density_estimation.py
docs/source/images/gallery_images/gallery_gibbs_sampling.png
docs/source/images/gallery_images/gallery_gibbs_sampling.py
docs/source/images/gallery_images/gallery_gpr.png
docs/source/images/gallery_images/gallery_gpr.py
docs/source/images/gallery_images/gallery_hdi.png
docs/source/images/gallery_images/gallery_hdi.py
docs/source/images/gallery_images/gallery_hmc.png
docs/source/images/gallery_images/gallery_hmc.py
docs/source/images/gallery_images/gallery_matrix.py
docs/source/images/getting_started_images/gaussian_data.png
docs/source/images/getting_started_images/getting_started_image_production.py
docs/source/images/getting_started_images/matrix_plot_example.png
docs/source/images/getting_started_images/pdf_summary_example.png
docs/source/images/getting_started_images/plot_diagnostics_example.png
docs/source/images/getting_started_images/prediction_uncertainty_example.png
docs/source/images/matrix_plot_images/matrix_plot_example.png
docs/source/images/matrix_plot_images/matrix_plot_image_production.py
inference/__init__.py
inference/_version.py
inference/acquisition.py
inference/covariance.py
inference/gp.py
inference/gp_tools.py
inference/likelihoods.py
inference/mcmc.py
inference/mean.py
inference/pdf.py
inference/pdf_tools.py
inference/plotting.py
inference/posterior.py
inference/priors.py
inference/__pycache__/__init__.cpython-36.pyc
inference/__pycache__/gp_tools.cpython-36.pyc
inference/__pycache__/mcmc.cpython-36.pyc
inference/__pycache__/pdf_tools.cpython-36.pyc
inference_tools.egg-info/PKG-INFO
inference_tools.egg-info/SOURCES.txt
inference_tools.egg-info/dependency_links.txt
inference_tools.egg-info/requires.txt
inference_tools.egg-info/top_level.txt
tests/test_covariance.py
tests/test_likelihoods.py
tests/test_pdf.py
tests/test_plotting.py
tests/test_posterior.py
tests/test_priors.py
tests/gp/test_GpLinearInverter.py
tests/gp/test_GpOptimiser.py
tests/gp/test_GpRegressor.py
tests/mcmc/mcmc_utils.py
tests/mcmc/test_ensemble.py
tests/mcmc/test_gibbs.py
tests/mcmc/test_hamiltonian.py
tests/mcmc/test_pca.py