anndata==0.7.6
click==8.0.1
# deepcell==0.10.0  # install manually first, to avoid version conflicts
fcswrite==0.6.1
h5py==3.2.1  # cellprofiler 4.2.1 requires 3.2.1 (note: deepcell 0.10.0 requires tensorflow 2.5.1, which requires ~=3.1.0)
imctools==2.1.8
networkx==2.6.3
numpy==1.21.2  # note: deepcell 0.10.0 requires <1.20.0
pandas==1.3.3
pyyaml==5.4.1
scikit-image==0.18.3
scipy==1.7.1
tifffile==2021.8.30
xtiff==0.7.6
