Metadata-Version: 1.1
Name: qarrayrun
Version: 1.1.0
Summary: A helper tool for running array jobs on an HPC computational node.
Home-page: https://github.com/CFSAN-Biostatistics/qarrayrun
Author: Steve Davis
Author-email: steven.davis@fda.hhs.gov
License: BSD
Description: ===============================
        qarrayrun
        ===============================
        
        
        .. Image showing the PyPI version badge - links to PyPI
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        A helper tool for running array jobs on an HPC computational node.
        
        The qarrayrun package was developed by the United States Food
        and Drug Administration, Center for Food Safety and Applied Nutrition.
        
        This script executes a single slot of an array job on an HPC compute node.
        It is intended to be used with Sun Grid Engine, SLURM, or Torque job schedulers.
        It assumes every instance of the job array runs the same command but with
        different arguments.  This script performs the work of looking-up the
        arguments in a text file and substituting those arguments into the command
        to be executed.
        
        * Free software
        * Documentation: https://qarrayrun.readthedocs.io
        * Source Code: https://github.com/CFSAN-Biostatistics/qarrayrun
        * PyPI Distribution: https://pypi.python.org/pypi/qarrayrun
        
        
        Features
        --------
        
        * Executes a single slot of an array job on an HPC compute node
        * Simple parameter lookup language
        * Supports execution in a subshell when needed
        
        
        Citing qarrayrun
        --------------------------------------
        
        To cite qarrayrun, please reference the qarrayrun GitHub repository:
        
            https://github.com/CFSAN-Biostatistics/qarrayrun
        
        
        License
        -------
        
        See the LICENSE file included in the qarrayrun distribution.
        
        
        
        
        
        History
        =======
        
        1.1.0 (2020-04-28)
        ---------------------
        * Update command line help to mention SLURM support.
        
        
        1.0.1 (2018-12-11)
        ---------------------
        * Fix the text in usage example.
        
        
        1.0.0 (2018-11-29)
        ---------------------
        * First public release.
        
Keywords: bioinformatics,NGS,qarrayrun
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: BSD License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
