AUTHORS.rst
CONTRIBUTING.rst
HISTORY.rst
LICENSE
MANIFEST.in
README.md
setup.cfg
setup.py
versioneer.py
Tutorial/Tutorial.md
Tutorial/overview_paper_pipeline.pdf
Tutorial/example_models/.DS_Store
Tutorial/example_models/ecc2_dcmp.xml
Tutorial/example_models/ecoli429276.xml
Tutorial/example_models/ecoli5010.xml
Tutorial/example_models/iPS189.xml
Tutorial/example_models/mmsyn.xml
Tutorial/example_models/overview.md
Tutorial/example_results/ecoli5010_bounds.info
Tutorial/example_results/ecoli5010_cmp_bounds_efmtool.efms
Tutorial/example_results/ecoli5010_cmp_bounds_mplrs.efms
Tutorial/example_results/ecoli5010_cmp_nobounds_efmtool.efms
Tutorial/example_results/ecoli5010_cmp_nobounds_mplrs.efms
Tutorial/example_results/ecoli5010_nobounds.info
docs/Makefile
docs/authors.rst
docs/conf.py
docs/contributing.rst
docs/efmlrs.postprocessing.decompressions.rst
docs/efmlrs.postprocessing.rst
docs/efmlrs.preprocessing.compressions.rst
docs/efmlrs.preprocessing.rst
docs/efmlrs.rst
docs/efmlrs.util.rst
docs/history.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/modules.rst
docs/readme.rst
docs/usage.rst
efmlrs/__init__.py
efmlrs/_version.py
efmlrs/post.py
efmlrs/pre.py
efmlrs.egg-info/PKG-INFO
efmlrs.egg-info/SOURCES.txt
efmlrs.egg-info/dependency_links.txt
efmlrs.egg-info/entry_points.txt
efmlrs.egg-info/requires.txt
efmlrs.egg-info/top_level.txt
efmlrs/postprocessing/__init__.py
efmlrs/postprocessing/decompressing.py
efmlrs/postprocessing/get_data.py
efmlrs/postprocessing/decompressions/__init__.py
efmlrs/postprocessing/decompressions/deadend.py
efmlrs/postprocessing/decompressions/null_space.py
efmlrs/postprocessing/decompressions/one2many.py
efmlrs/preprocessing/__init__.py
efmlrs/preprocessing/boundaries.py
efmlrs/preprocessing/get_data.py
efmlrs/preprocessing/mplrs_output.py
efmlrs/preprocessing/compressions/__init__.py
efmlrs/preprocessing/compressions/deadend.py
efmlrs/preprocessing/compressions/echelon.py
efmlrs/preprocessing/compressions/null_space.py
efmlrs/preprocessing/compressions/one2many.py
efmlrs/util/__init__.py
efmlrs/util/convert_matrix.py
efmlrs/util/data.py
efmlrs/util/log.py
tests/__init__.py
tests/test_efmlrs.py
tests/example_models/ecoli5010.xml
tests/example_results/ecoli5010.info
tests/example_results/ecoli5010_cmp_mplrs.efms