Metadata-Version: 2.1
Name: napari-deepfinder
Version: 0.0.1
Summary: A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.
Home-page: https://github.com/deep-finder/napari-deepfinder
Author: Constantin Aronssohn
Author-email: cnstt@tutanota.com
License: GPL-3.0-only
Project-URL: Bug Tracker, https://github.com/deep-finder/napari-deepfinder/issues
Project-URL: Documentation, https://deep-finder.github.io/napari-deepfinder/
Project-URL: Source Code, https://github.com/deep-finder/napari-deepfinder
Project-URL: User Support, https://github.com/deep-finder/napari-deepfinder/issues
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Education
Classifier: Intended Audience :: Science/Research
Classifier: Framework :: napari
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Visualization
Classifier: Topic :: Scientific/Engineering :: Information Analysis
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
Classifier: Topic :: Scientific/Engineering :: Image Processing
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Operating System :: OS Independent
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Requires-Python: >=3.8
Description-Content-Type: text/markdown
Provides-Extra: testing
License-File: LICENSE

# napari-deepfinder

[![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-deepfinder.svg?color=green)](https://github.com/deep-finder/napari-deepfinder/raw/main/LICENSE)
[![PyPI](https://img.shields.io/pypi/v/napari-deepfinder.svg?color=green)](https://pypi.org/project/napari-deepfinder)
[![Python Version](https://img.shields.io/pypi/pyversions/napari-deepfinder.svg?color=green)](https://python.org)
[![tests](https://github.com/deep-finder/napari-deepfinder/workflows/tests/badge.svg)](https://github.com/deep-finder/napari-deepfinder/actions)
[![codecov](https://codecov.io/gh/deep-finder/napari-deepfinder/branch/main/graph/badge.svg)](https://codecov.io/gh/deep-finder/napari-deepfinder)
[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-deepfinder)](https://napari-hub.org/plugins/napari-deepfinder)

A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities.
An orthoslice view has been added for an easier visualisation and annotation process.

**The documentation for users is available [here](https://deep-finder.github.io/napari-deepfinder/).**

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This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template.

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## Installation

You can install `napari-deepfinder` via [pip]:

    pip install napari-deepfinder



To install latest development version :

    pip install git+https://github.com/deep-finder/napari-deepfinder.git


## Contributing

Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.

## License

Distributed under the terms of the [GNU GPL v3.0] license,
"napari-deepfinder" is free and open source software

## Issues

If you encounter any problems, please [file an issue] along with a detailed description.

[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin

[file an issue]: https://github.com/deep-finder/napari-deepfinder/issues

[napari]: https://github.com/napari/napari
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/
