Metadata-Version: 2.1
Name: pyCDxAnalysis
Version: 0.0.28
Summary: Integrative tools to anlysis companian diagnosis gene data set.
Home-page: https://github.com/JaylanLiu/pyCDxAnalysis
Author: JaylanLiu
Author-email: liujilong@genomics.cn
License: UNKNOWN
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Developers
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Description-Content-Type: text/markdown
License-File: LICENSE

# pyCDxAnalysis
pyCDxAnalysis is a python library to format, filter, analyze and visulize cancer companian diagnosis data in a unifying thread. It provides universal interface to filter samples via a range of condition, and various methods to perform most commonly used analysis in cancer genomics.

## Installation
From source code.
```
$ git clone https://github.com/JaylanLiu/pyCDxAnalysis
$ cd pyCDxAnalysis
$ python setup.py install 
```

To install the package with pip, run:
```
pip install pyCDxAnalysis
```

## Example usage
An executable demonstration of the package is available on GitHub as a Jupyter Notebook, 
https://github.com/JaylanLiu/pyCDxAnalysis/blob/main/pyCDxAnalysis/pyCDxAnalysis_test.ipynb.


