MANIFEST.in
README.rst
setup.cfg
setup.py
docs/CONTRIBUTING.rst
docs/LICENSE.rst
docs/Makefile
docs/RS232.rst
docs/automation_exceptions.rst
docs/automation_messages_form_layout.rst
docs/conf.py
docs/connect_slidebook.rst
docs/connect_zen_black.rst
docs/connect_zen_blue.rst
docs/correct_background.rst
docs/draw_plate.rst
docs/error_handling.rst
docs/find_cells.rst
docs/find_positions.rst
docs/find_well_center.rst
docs/get_path.rst
docs/hardware_components.rst
docs/hardware_control.rst
docs/hardware_control_3i.rst
docs/hardware_control_zeiss.rst
docs/image_AICS.rst
docs/index.rst
docs/installation.rst
docs/intelligent_imaging_innovations.rst
docs/interactive_location_picker_pyqtgraph.rst
docs/load_image_czi.rst
docs/make.bat
docs/meta_data_file.rst
docs/microscope_automation.rst
docs/positions_list.rst
docs/preferences.rst
docs/samples.rst
docs/setup_microscope.rst
docs/setup_samples.rst
docs/slidebook_experiment_info.rst
docs/software_state.rst
docs/tile_images.rst
docs/write_zen_tiles_experiment.rst
docs/zeiss.rst
docs/zen_experiment_info.rst
microscope_automation/__init__.py
microscope_automation.egg-info/PKG-INFO
microscope_automation.egg-info/SOURCES.txt
microscope_automation.egg-info/dependency_links.txt
microscope_automation.egg-info/not-zip-safe
microscope_automation.egg-info/requires.txt
microscope_automation.egg-info/top_level.txt
microscope_automation/connectors/__init__.py
microscope_automation/connectors/connect_slidebook.py
microscope_automation/connectors/connect_zen_black.py
microscope_automation/connectors/connect_zen_blue.py
microscope_automation/connectors/connect_zen_blue_dummy.py
microscope_automation/hardware/RS232.py
microscope_automation/hardware/RS232_dummy.py
microscope_automation/hardware/__init__.py
microscope_automation/hardware/hardware_components.py
microscope_automation/hardware/hardware_control.py
microscope_automation/hardware/hardware_control_3i.py
microscope_automation/hardware/hardware_control_zeiss.py
microscope_automation/hardware/setup_microscope.py
microscope_automation/imports/__init__.py
microscope_automation/imports/intelligent_imaging_innovations.py
microscope_automation/imports/zeiss.py
microscope_automation/orchestrator/__init__.py
microscope_automation/orchestrator/find_positions.py
microscope_automation/orchestrator/microscope_automation.py
microscope_automation/orchestrator/write_zen_tiles_experiment.py
microscope_automation/samples/__init__.py
microscope_automation/samples/correct_background.py
microscope_automation/samples/draw_plate.py
microscope_automation/samples/find_cells.py
microscope_automation/samples/find_well_center.py
microscope_automation/samples/interactive_location_picker_pyqtgraph.py
microscope_automation/samples/positions_list.py
microscope_automation/samples/samples.py
microscope_automation/samples/segmentation_filters.py
microscope_automation/samples/setup_samples.py
microscope_automation/samples/tile_images.py
microscope_automation/samples/well_overview_segmentation.py
microscope_automation/samples/well_segmentation_refined.py
microscope_automation/settings/__init__.py
microscope_automation/settings/meta_data_file.py
microscope_automation/settings/preferences.py
microscope_automation/settings/slidebook_experiment_info.py
microscope_automation/settings/test_zen_experiment.py
microscope_automation/settings/zen_experiment_info.py
microscope_automation/util/__init__.py
microscope_automation/util/automation_exceptions.py
microscope_automation/util/automation_messages_form_layout.py
microscope_automation/util/error_handling.py
microscope_automation/util/get_path.py
microscope_automation/util/image_AICS.py
microscope_automation/util/load_image_czi.py
microscope_automation/util/software_state.py