.gitignore
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LICENSE
README.rst
pypi.sh
requirements.txt
setup.py
bin/gtf2bed4trackc
docs/Makefile
docs/_config.yml
docs/api.rst
docs/conf.py
docs/custom-formats.pct.py
docs/developer.rst
docs/faq.rst
docs/gallery.rst
docs/index.rst
docs/install.rst
docs/make.bat
docs/modules.rst
docs/references.bib
docs/references.rst
docs/releases.rst
docs/requirements.txt
docs/source
docs/trackc.pa.rst
docs/trackc.pl.rst
docs/trackc.rst
docs/trackc.tl.rst
docs/tutorials.rst
docs/utils.py
docs/_static/demo.png
docs/_static/plotly_logo.png
docs/_static/switcher.json
docs/_static/theme_override.css
docs/_templates/module.rst
docs/binder/requirements.txt
docs/developer/about_us.rst
docs/developer/history.rst
docs/developer/index.rst
docs/examples/README.txt
docs/examples/bw_track_tutorial.ipynb
docs/examples/cmap-test-data.ipynb
docs/examples/mapc_eg.ipynb
docs/examples/neotad.png
docs/examples/rearranged_interactions.ipynb
docs/examples/zoomin_heatmap.png
docs/images/trackc-brand-board-your-branding-colors-and-fonts.zip
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docs/images/trackc-logo-zip-file.zip
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docs/images/tutorials/grid_spec_01.png
docs/images/tutorials/quick_start.png
docs/images/tutorials/zoomin_heatmap.png
docs/tutorials/ENCFF041XLP.bedpe
docs/tutorials/README.txt
docs/tutorials/Virtual4C.ipynb
docs/tutorials/bed.ipynb
docs/tutorials/bigwig.ipynb
docs/tutorials/bw_track_tutorial.ipynb
docs/tutorials/cmap-test-data.ipynb
docs/tutorials/contactmap.ipynb
docs/tutorials/datas.ipynb
docs/tutorials/gene.ipynb
docs/tutorials/gene_track.pdf
docs/tutorials/grid_spec.ipynb
docs/tutorials/links.ipynb
docs/tutorials/mapc_eg.ipynb
docs/tutorials/mapc_markline.ipynb
docs/tutorials/scalebar.ipynb
docs/tutorials/trackc_scale.pdf
docs/tutorials/zoomin.ipynb
docs/tutorials/fileformats/GRCh38.84.bed12
docs/tutorials/fileformats/GRCh38.84.gtf.bed12
docs/tutorials/fileformats/bed12.rst
docs/tutorials/fileformats/mcool.rst
src/trackc/__init__.py
src/trackc/_utils.py
src/trackc/gs.py
src/trackc.egg-info/PKG-INFO
src/trackc.egg-info/SOURCES.txt
src/trackc.egg-info/dependency_links.txt
src/trackc.egg-info/requires.txt
src/trackc.egg-info/top_level.txt
src/trackc/pa/__init__.py
src/trackc/pa/cmaps.py
src/trackc/pa/palettes.py
src/trackc/pl/Virtual4C.py
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src/trackc/pl/bed.py
src/trackc/pl/bigwig.py
src/trackc/pl/gene.py
src/trackc/pl/links.py
src/trackc/pl/mapc.py
src/trackc/pl/mapc_markline.py
src/trackc/pl/mapc_xylim.txt
src/trackc/pl/scale.py
src/trackc/pl/zoomin.py
src/trackc/scripts/__init__.py
src/trackc/scripts/gtf2bed12.py
src/trackc/tl/__init__.py
src/trackc/tl/_getRegionsCmat.py