Metadata-Version: 2.1
Name: spin
Version: 0.0.1.dev0
Summary: Spatial omics analysis
Author: Danila Bredikhin
Maintainer-email: Danila Bredikhin <danila.bredikhin@embl.de>
Requires-Python: >=3.8
Description-Content-Type: text/markdown
Requires-Dist: anndata
Requires-Dist: bump2version ; extra == "dev"
Requires-Dist: sphinx>=4 ; extra == "doc"
Requires-Dist: furo ; extra == "doc"
Requires-Dist: myst-parser ; extra == "doc"
Requires-Dist: sphinxcontrib-bibtex>=1.0.0 ; extra == "doc"
Requires-Dist: scanpydoc[typehints]>=0.7.4 ; extra == "doc"
Requires-Dist: nbsphinx ; extra == "doc"
Requires-Dist: ipython>=8.3.0 ; extra == "doc"
Requires-Dist: pytest ; extra == "test"
Requires-Dist: pytest-cov ; extra == "test"
Project-URL: Documentation, https://spin.readthedocs.io/
Project-URL: Home-page, https://github.com/gtca/spin
Project-URL: Source, https://github.com/gtca/spin
Provides-Extra: dev
Provides-Extra: doc
Provides-Extra: test

# spin

[![Tests][badge-tests]][link-tests]
[![Documentation][badge-docs]][link-docs]

[badge-tests]: https://img.shields.io/github/workflow/status/gtca/spin/Test/main
[link-tests]: https://github.com/gtca/spin/actions/workflows/test.yml
[badge-docs]: https://img.shields.io/readthedocs/spin

Spatial omics analysis

## Getting started

Please refer to the [documentation][link-docs]. In particular, the

-   [API documentation][link-api].

## Installation

You need to have Python 3.8 or newer installed on your system. If you don't have
Python installed, we recommend installing `Miniconda <https://docs.conda.io/en/latest/miniconda.html>`\_.

There are several alternative options to install spin:

<!--
1) Install the latest release of `spin` from `PyPI <https://pypi.org/project/spin/>`_:

```bash
pip install spin
```
-->

1. Install the latest development version:

```bash
pip install git+https://github.com/gtca/spin.git@main
```

## Release notes

See the [changelog][changelog].

## Contact

For questions and help requests, you can reach out in the [scverse discourse][scverse-discourse].
If you found a bug, please use the [issue tracker][issue-tracker].

## Citation

> t.b.a

[scverse-discourse]: https://discourse.scverse.org/
[issue-tracker]: https://github.com/gtca/spin/issues
[changelog]: https://spin.readthedocs.io/latest/changelog.html
[link-docs]: https://spin.readthedocs.io
[link-api]: https://spin.readthedocs.io/latest/api.html

