LICENSE
README.md
pyproject.toml
setup.py
batch_seqr_loader/__init__.py
batch_seqr_loader/batch_workflow.py
batch_seqr_loader/seqr_loader/__init__.py
batch_seqr_loader/seqr_loader/sm_utils.py
batch_seqr_loader/seqr_loader/utils.py
gcloud_dataproc/__init__.py
gcloud_dataproc/create_persistent_es_nodes.py
hail_scripts/__init__.py
hail_scripts/shared/__init__.py
hail_scripts/shared/elasticsearch_client_v7.py
hail_scripts/shared/elasticsearch_utils.py
hail_scripts/shared/elasticsearch_utils_tests.py
hail_scripts/v02/__init__.py
hail_scripts/v02/utils/__init__.py
hail_scripts/v02/utils/clinvar.py
hail_scripts/v02/utils/elasticsearch_client.py
hail_scripts/v02/utils/elasticsearch_utils.py
hail_scripts/v02/utils/hail_utils.py
hail_scripts/v02/utils/computed_fields/__init__.py
hail_scripts/v02/utils/computed_fields/flags.py
hail_scripts/v02/utils/computed_fields/test_flags.py
hail_scripts/v02/utils/computed_fields/test_variant_id.py
hail_scripts/v02/utils/computed_fields/variant_id.py
hail_scripts/v02/utils/computed_fields/vep.py
kubernetes/__init__.py
kubernetes/kubectl_utils.py
kubernetes/network_utils.py
kubernetes/shell_utils.py
kubernetes/yaml_settings_utils.py
luigi_pipeline/lib/__init__.py
luigi_pipeline/lib/global_config.py
luigi_pipeline/lib/hail_tasks.py
luigi_pipeline/lib/hail_vep_runners.py
luigi_pipeline/lib/model/__init__.py
luigi_pipeline/lib/model/base_mt_schema.py
luigi_pipeline/lib/model/seqr_mt_schema.py
seqr_loader.egg-info/PKG-INFO
seqr_loader.egg-info/SOURCES.txt
seqr_loader.egg-info/dependency_links.txt
seqr_loader.egg-info/not-zip-safe
seqr_loader.egg-info/top_level.txt
sv_pipeline/__init__.py