README.md
setup.cfg
setup.py
clip/GTxFeature.py
clip/Gene.py
clip/GeneLengthSummary.py
clip/GeneRegion.py
clip/__init__.py
clip/bamCLIP.py
clip/bedCLIP.py
clip/clip.py
clip/command_line.py
clip/countCLIP.py
clip/createMatrix.py
clip/gffCLIP.py
clip/output.py
htseq_clip.egg-info/PKG-INFO
htseq_clip.egg-info/SOURCES.txt
htseq_clip.egg-info/dependency_links.txt
htseq_clip.egg-info/entry_points.txt
htseq_clip.egg-info/not-zip-safe
htseq_clip.egg-info/requires.txt
htseq_clip.egg-info/top_level.txt
tests/__init__.py
tests/bamCLIP_test.py
tests/countCLIP_test.py
tests/createMatrix_test.py
tests/gffCLIP_test.py