biopandas
biopython
bioservices
matplotlib
multipledispatch
networkx
numpy
pandas
plotly
pydantic
pyyaml>=5.1
scikit-learn
scipy
tqdm
typing_extensions
wget
xarray

[all]
hypothesis
isort
nbval
pydocstyle
furo
interrogate
pre-commit
sphinx
pytest
nbstripout
sphinx_rtd_theme
nbsphinx
pandoc
nbsphinx-link
pytest-xdist
black
flake8
pytest-cov
pycodestyle

[dev]
black
flake8
furo
hypothesis
interrogate
isort
nbsphinx
nbsphinx-link
sphinx_rtd_theme
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist
sphinx

[extras]
black
flake8
furo
hypothesis
interrogate
isort
nbsphinx
nbsphinx-link
sphinx_rtd_theme
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist
sphinx
