+-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
|                                                                                            Aminoglycoside                                                                                             |
+-------------------+------------+--------------------------------+------------+-------------------------+-------------------------+----------------------+---------------------------+-----------------+
| Resistance gene   |   Identity | Alignment Length/Gene Length   |   Coverage | Position in reference   | Contig                  | Position in contig   | Phenotype                 | Accession no.   |
|-------------------+------------+--------------------------------+------------+-------------------------+-------------------------+----------------------+---------------------------+-----------------|
| aac(6')-Iaa       |    99.3151 | 438/438                        |        100 | 1..438                  | contig1|denovo|js19S173 | 164269..164706       | Aminoglycoside resistance | NC_003197       |
+-------------------+------------+--------------------------------+------------+-------------------------+-------------------------+----------------------+---------------------------+-----------------+

+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
|                                                                                             Phenicol                                                                                             |
+-------------------+------------+--------------------------------+------------+-------------------------+--------------------------+----------------------+---------------------+-----------------+
| Resistance gene   |   Identity | Alignment Length/Gene Length   |   Coverage | Position in reference   | Contig                   | Position in contig   | Phenotype           | Accession no.   |
|-------------------+------------+--------------------------------+------------+-------------------------+--------------------------+----------------------+---------------------+-----------------|
| floR              |    98.5532 | 1175/1215                      |    96.7078 | 1..1175                 | contig20|denovo|js19S173 | 13..1187             | Phenicol resistance | AF118107        |
+-------------------+------------+--------------------------------+------------+-------------------------+--------------------------+----------------------+---------------------+-----------------+

##################### aminoglycoside #####################
aac(6')-Iaa, ID: 99.32 %, Alignment Length/Gene Length: 438/438, Coverage: 100.0, Positions in reference: 1..438, Contig name: contig1|denovo|js19S173, Position: 164269..164706

ATGGACATCAGGCAAATGAACAGAACCCATCTGGATCACTGGCGCGGATTGCGAAAACAG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ATGGACATCAGGCAAATGAACAGAACCCATCTGGATCACTGGCGCGGATTGCGAAAACAG

CTCTGGCCTGGTCACCCGGATGACGCCCATCTGGCGGACGGCGAAGAAATTCTGCAAGCC
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CTCTGGCCTGGTCACCCGGATGACGCCCATCTGGCGGACGGCGAAGAAATTCTGCAAGCC

GATCATCTGGCATCATTTATTGCGATGGCAGACGGGGTGGCGATTGGCTTTGCGGATGCC
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GATCATCTGGCATCATTTATTGCGATGGCAGACGGGGTGGCGATTGGCTTTGCGGATGCC

TCAATCCGCCACGATTATGTCAATGGCTGTGACAGTTCGCCCGTGGTTTTCCTTGAAGGT
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
TCAATCCGCCACGATTATGTCAATGGCTGTGACAGTTCGCCCGTGGCTTTCCTTGAAGGT

ATTTTTGTTCTCCCCTCATTCCGTCAACGCGGCGTAGCGAAACAATTGATTGCAGCGGTG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ATTTTTGTTCTCCCCTCATTCCGTCAACGCGGCGTAGCGAAACAATTGATTGCAGCGGTG

CAACGATGGGGAACGAATAAAGGGTGTCGGGAAATGGCCTCCGATACCTCGCCGGAAAAT
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CAACGATGGGGAACGAATAAAGGGTGTCGGGAAATGGCCTCCGATACCTCGCCGGAAAAT

ACAATTTCCCAGAAAGTTCATCAGGCGTTAGGATTTGAGGAAACAGAGCGCGTCATTTTC
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
ACAATTTCCCAGAAAGTTCACCAGGCGTTAGGATTTGAGGAAACAGAGCGCGTCATTTTC

TACCGAAAGCGTTGTTGA
||||| ||||||||||||
TACCGGAAGCGTTGTTGA


##################### phenicol #####################
floR, ID: 98.55 %, Alignment Length/Gene Length: 1175/1215, Coverage: 96.70781893004116, Positions in reference: 1..1175, Contig name: contig20|denovo|js19S173, Position: 13..1187

ATGACCACCACACGCCCCGCGTGGGCCTATACGCTGCCGGCAGCACTGCTGCTGATGGCT
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ATGACCACCACACGCCCCGCGTGGGCCTATACGCTGCCGGCAGCACTGCTGCTGATGGCT

CCTTTCGACATCCTCGCTTCACTGGCGATGGATATTTATCTCCCTGTCGTTCCAGCGATG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CCTTTCGACATCCTCGCTTCACTGGCGATGGATATTTATCTCCCTGTCGTTCCAGCGATG

CCCGGCATCCTGAACACGACGCCCGCTATGATCCAACTCACGTTGAGCCTCTATATGGTG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CCCGGCATCCTGAACACGACGCCCGCTATGATCCAACTCACGTTGAGCCTCTATATGGTG

ATGCTCGGCGTGGGCCAGGTGATTTTTGGTCCGCTCTCAGACAGAATCGGGCGACGGCCA
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ATGCTCGGCGTGGGCCAGGTGATTTTTGGTCCGCTCTCAGACAGAATCGGGCGACGGCCA

ATTCTACTTGCGGGCGCAACGGCTTTCGTCATTGCGTCTCTGGGAGCAGCTTGGTCTTCA
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ATTCTACTTGCGGGCGCAACGGCTTTCGTCATTGCGTCTCTGGGAGCAGCTTGGTCTTCA

ACTGCACCGGCCTTTGTCGCTTTCCGTCTACTTCAAGCAGTGGGCGCGTCGGCCATGCTG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ACTGCACCGGCCTTTGTCGCTTTCCGTCTACTTCAAGCAGTGGGCGCGTCGGCCATGCTG

GTGGCGACGTTCGCGACGGTTCGCGACGTTTATGCCAACCGTCCTGAGGGTGTCGTCATC
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GTGGCGACGTTCGCGACGGTTCGCGACGTTTATGCCAACCGTCCTGAGGGTGTCGTCATC

TACGGCCTTTTCAGTTCGATGCTGGCGTTCGTGCCTGCGCTCGGCCCTATCGCCGGAGCA
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
TACGGCCTTTTCAGTTCGATGCTGGCGTTCGTGCCTGCGCTCGGCCCTATCGCCGGAGCA

TTGATCGGCGAGTTCTTGGGATGGCAGGCGATATTCATTACTTTGGCTATACTGGCGATG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
TTGATCGGCGAGTTCTTGGGATGGCAGGCGATATTCATTACTTTGGCTATACTGGCGATG

CTCGCACTCCTAAATGCGGGTTTCAGGTGGCACGAAACCCGCCCTCTGGATCAAGTCAAG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CTCGCACTCCTAAATGCGGGTTTCAGGTGGCACGAAACCCGCCCTCTGGATCAAGTCAAG

ACGCGCCGATCTGTCTTGCCGATCTTCGCGAGTCCGGCTTTTTGGGTTTACACTGTCGGC
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ACGCGCCGATCTGTCTTGCCGATCTTCGCGAGTCCGGCTTTTTGGGTTTACACTGTCGGC

TTTAGCGCCGGTATGGGCACCTTCTTCGTCTTCTTCTCGACGGCTCCCCGTGTGCTCATA
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
TTTAGCGCCGGTATGGGCACCTACTTCGTCTTCTTCTCGACGGCTCCCCGTGTGCTCATA

GGCCAAGCGGAATATTCCGAGATCGGATTCAGCTTTGCCTTCGCCACTGTCGCGCTTGTA
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GGCCAAGCGGAATATTCCGAGATCGGATTCAGCTTTGCCTTCGCCACTGTCGCGCTTGTA

ATGATCGTGACAACCCGTTTCGCGAAGTCCTTTGTCGCCAGATGGGGCATCGCAGGATGC
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ATGATCGTGACAACCCGTTTCGCGAAGTCCTTTGTCGCCAGATGGGGCATCGCAGGATGC

GTGGCGCGTGGGATGGCGTTGCTTGTTTGCGGAGCGGTCCTGTTGGGGATCGGCGAACTT
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GTGGCGCGTGGGATGGCGTTGCTTGTTTGCGGAGCGGTCCTGTTGGGGATCGGCGAACTT

TACGGCTCGCCGTCATTCCTCACCTTCATCCTACCGATGTGGGTTGTCGCGGTCGGTATT
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
TACGGCTCGCCGTCATTCCTCACCTTCATCCTACCGATGTGGGTTGTCGCGGTCGGTATT

GTCTTCACGGTGTCCGTTACCGCGAACGGCGCTTTGGCAGAGTTCGACGACATCGCGGGA
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GTCTTCACGGTGTCCGTTACCGCGAACGGCGCTTTGGCAGAGTTCGACGACATCGCGGGA

TCAGCGGTCGCGTTCTACTTCTGCATCCAAAGCCTGATAGTCAGTATCGTCGGGACATTG
|||||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||
TCAGCGGTCGCGTTCTACTTCTGCGTTCAAAGCCTGATAGTCAGCATTGTCGGGACATTG

GCGGTGACGCTGTTAAACGGCGATACAGCGTGGCCCGTGATTTGTTACGCCACGGCAATG
|||||| | || |||||||  || ||||||||||||||||| |||||||||||||| |||
GCGGTGGCACTTTTAAACGATGACACAGCGTGGCCCGTGATCTGTTACGCCACGGCGATG

GCAGTGCTGGTGTCGTTGGGGCTGGCGCTCCTTCGATCCCGTGATGCTGCCACCGAGAAG
|| || ||||| ||||||||||||| |||||||||                         
GCGGTACTGGTTTCGTTGGGGCTGGTGCTCCTTCGgaggcaccccg--------------

TCGCCAGTCGTCTAG
               
---------------


