Metadata-Version: 1.2
Name: ilus
Version: 1.0.0
Summary: ilus: A WGS/WES analysis pipeline generater.
Home-page: https://github.com/ShujiaHuang/ilus
Author: Shujia Huang
Author-email: huangshujia9@gmail.com
Maintainer: Shujia Huang
Maintainer-email: huangshujia9@gmail.com
License: BSD (3-clause)
Download-URL: https://github.com/ShujiaHuang/ilus
Description: Ilus
        ====
        
        
        **Ilus** is a handy pipeline generater for whole genome re-sequencing (WGS) and whole exom sequencing data (WES) analysis.
        
        Installation
        ------------
        Ilus is writed by Python and maintain in PyPI. You can install it just by running the following command:
        
        .. code:: bash
        
            pip install ilus
        
        You can type **ilus** in your commandline terminal if everything is smooth.
        
        Quick Start
        -----------
        
        There are several functions in **ilus**:
        
        .. code:: bash
        
            $ ilus --help
        
        You will see all the functions:
        
        .. code:: bash
        
            usage: ilus [-h] {WGS,genotype-joint-calling,VQSR} ...
        
            ilus: A WGS analysis pipeline.
        
            optional arguments:
                -h, --help            show this help message and exit
        
            ilus commands:
            {WGS,genotype-joint-calling,VQSR}
                WGS                 Creating pipeline for WGS(from fastq to genotype VCF)
                genotype-joint-calling Genotype from GVCFs.
                VQSR                VQSR
        
        
        Here is all the Chinese `README <https://github.com/ShujiaHuang/ilus/blob/master/README_cn.rst>`_ for how to creat WGS/WES pipeline by ilus. 
        
        English version is coming.  
        
        
        
        
Platform: UNKNOWN
Classifier: Intended Audience :: Science/Research
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.7
Classifier: License :: OSI Approved :: BSD License
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Operating System :: POSIX
Classifier: Operating System :: POSIX :: Linux
Classifier: Operating System :: MacOS
