LICENSE.md
MANIFEST.in
README.md
TODO.md
pyproject.toml
setup.py
jcast/__init__.py
jcast/__main__.py
jcast/get_gtf.py
jcast/get_jxn.py
jcast/get_rma.py
jcast/get_seq.py
jcast/helpers.py
jcast/main.py
jcast/read_fa.py
jcast.egg-info/PKG-INFO
jcast.egg-info/SOURCES.txt
jcast.egg-info/dependency_links.txt
jcast.egg-info/entry_points.txt
jcast.egg-info/requires.txt
jcast.egg-info/top_level.txt
tests/__init__.py
tests/test_psq.py
tests/data/genome/Homo_sapiens.GRCh38.89.chromosome.15.gtf
tests/data/genome/Homo_sapiens.GRCh38.89.chromosome.15.gtf.cached
tests/data/genome/Homo_sapiens.GRCh38.dna.chromosome.15.fa.gz
tests/data/rmats/A3SS.MATS.JC.txt
tests/data/rmats/A5SS.MATS.JC.txt
tests/data/rmats/MXE.MATS.JC.txt
tests/data/rmats/RI.MATS.JC.txt
tests/data/rmats/SE.MATS.JC.txt