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CMakeLists.txt
CONTRIBUTING.md
Dockerfile
LICENSE
Makefile
README.md
_config.yml
_toc.yml
cspell.config.yaml
pyproject.toml
setup.cfg
setup.py
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benchmarks/benchmark.py
benchmarks/lorentz.ode
benchmarks/lorentz.py
benchmarks/tentusscher_panfilov_2006_M_cell.ode
benchmarks/tentusscher_panfilov_2006_M_cell.py
cpp/CMakeLists.txt
cpp/GossConfig.cmake.in
cpp/goss/AdaptiveExplicitSolver.cpp
cpp/goss/AdaptiveExplicitSolver.h
cpp/goss/AdaptiveImplicitSolver.cpp
cpp/goss/AdaptiveImplicitSolver.h
cpp/goss/BasicImplicitEuler.cpp
cpp/goss/BasicImplicitEuler.h
cpp/goss/DoubleVector.h
cpp/goss/ESDIRK23a.cpp
cpp/goss/ESDIRK23a.h
cpp/goss/ESDIRK4O32.cpp
cpp/goss/ESDIRK4O32.h
cpp/goss/ExplicitEuler.cpp
cpp/goss/ExplicitEuler.h
cpp/goss/GRL1.cpp
cpp/goss/GRL1.h
cpp/goss/GRL2.cpp
cpp/goss/GRL2.h
cpp/goss/ImplicitEuler.cpp
cpp/goss/ImplicitEuler.h
cpp/goss/ImplicitODESolver.cpp
cpp/goss/ImplicitODESolver.h
cpp/goss/ODE.cpp
cpp/goss/ODE.h
cpp/goss/ODESolver.h
cpp/goss/ODESystemSolver.cpp
cpp/goss/ODESystemSolver.h
cpp/goss/ParameterizedODE.h
cpp/goss/RK2.cpp
cpp/goss/RK2.h
cpp/goss/RK4.cpp
cpp/goss/RK4.h
cpp/goss/RKF32.cpp
cpp/goss/RKF32.h
cpp/goss/RL1.cpp
cpp/goss/RL1.h
cpp/goss/RL2.cpp
cpp/goss/RL2.h
cpp/goss/ThetaSolver.cpp
cpp/goss/ThetaSolver.h
cpp/goss/constants.h
cpp/goss/goss.h
cpp/goss/types.h
cpp/goss/version.h
cpp/goss/version.h.in
cpp/tests/Arenstorf.h
cpp/tests/Brusselator.h
cpp/tests/CMakeLists.txt
cpp/tests/EulerRigidBody.h
cpp/tests/FG.h
cpp/tests/NonLinOscillator.h
cpp/tests/Panfilov.h
cpp/tests/PanfilovCSE.h
cpp/tests/PanfilovCSEArray.h
cpp/tests/PanfilovNoIntermediates.h
cpp/tests/Robertson.h
cpp/tests/SaltzLorenz.h
cpp/tests/Sin.h
cpp/tests/VDP.h
cpp/tests/Winslow.h
cpp/tests/WinslowCSE.h
cpp/tests/WinslowCSEArray.h
cpp/tests/WinslowNoIntermediates.h
cpp/tests/beeler_reuter_1977.h
cpp/tests/beeler_reuter_1977.ode
cpp/tests/fhn.h
cpp/tests/fhn.ode
cpp/tests/ode.cpp
cpp/tests/odesystem.cpp
cpp/tests/van_der_Pol.h
demo/bidomain.py
demo/fitzhughnagumo.ode
demo/lorentz.ode
demo/lorentz.py
demo/monodomain.py
demo/multicellmodel.py
demo/niederer_benchmark.py
demo/odes_on_mesh.py
demo/oscilator.ode
demo/oscilator_v1.py
demo/oscilator_v2.py
demo/oscilator_v3.py
demo/tentusscher.py
demo/tentusscher_field_parameters.py
demo/tentusscher_panfilov_2006_M_cell.ode
demo/tentusscher_panfilov_2006_epi_cell.ode
docs/api.rst
docs/cli.md
docs/comparison.md
docs/install.md
docs/math.md
docs/refs.bib
docs/structure.md
docs/testing.md
docs/_static/bidomain.png
docs/_static/cli.gif
docs/_static/components.png
docs/_static/logo.png
docs/_static/lorentz.png
docs/_static/monodomain.png
docs/_static/multicell.png
docs/_static/odes_on_mesh.png
docs/_static/oscilator.png
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python/CMakeLists.txt
python/wrapper.cpp
python/goss/__init__.py
python/goss/__main__.py
python/goss/cli.py
python/goss/codegeneration.py
python/goss/compilemodule.py
python/goss/cuda.py
python/goss/dolfinutils.py
python/goss/ode.py
python/goss/solvers.py
python/goss/systemsolver.py
python/pygoss.egg-info/PKG-INFO
python/pygoss.egg-info/SOURCES.txt
python/pygoss.egg-info/dependency_links.txt
python/pygoss.egg-info/entry_points.txt
python/pygoss.egg-info/requires.txt
python/pygoss.egg-info/top_level.txt
sandbox/differentspaces/differentspaces.py
sandbox/differentspaces/hybrid.ode
sandbox/differentspaces/rice_model_2008.ode
sandbox/differentspaces/rice_model_human_2008.ode
sandbox/gpu/monodomain2D.py
sandbox/gpu/tentusscher_panfilov_2006_M_cell.ode
sandbox/multicellmodel/fitzhughnagumo.ode
sandbox/multicellmodel/multicellmodel.py
sandbox/multicellmodel/tentusscher_panfilov_2006_epi_cell.ode
sandbox/solver_demo/demo.py
sandbox/solver_demo/oscilator.ode
sandbox/solver_demo/plot.py
tests/conftest.py
tests/fitzhughnagumo.ode
tests/oscilator.h
tests/oscilator.ode
tests/tentusscher_2004_mcell.ode
tests/test_cli.py
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tests/test_dolfin_utils.py
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tests/test_ode_system_solver_bindings.py
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