pyteomics.pepxmltk - a pepXML writer and Tandem2XML converter
---------------------------------------------------------------

**pyteomics.pepxmltk** is a module based on the
`pyteomics <http://pythonhosted.org/pyteomics/>`_ package that
allows creation of
`pepXML <http://tools.proteomecenter.org/wiki/index.php?title=Formats:pepXML>`_
files from Python objects of a certain structure. The structure corresponds to
tokens generated by the pyteomics TandemXML parser.

This package provides a module that can be used for writing pepXML files
from your Python code, as well as a command-line script for conversion, merging
or filtering of X!Tandem files to pepXML. Unlike its analog from Trans-Proteomic
Pipeline (TPP), the script is capable of handling non-standard enzymes.

Dependencies
------------

- pyteomics
- numpy
- lxml
- jinja2

Links
-----

- PyPI: https://pypi.python.org/pypi/pyteomics.pepxmltk
- BitBucket repo & issue tracker: https://bitbucket.org/markmipt/pyteomics.pepxmltk
- Mailing list: pyteomics@googlegroups.com
