Metadata-Version: 1.1
Name: pareidolia
Version: 0.1.0
Summary: Multi-sample change detection in Hi-C patterns
Home-page: https://github.com/cmdoret/pareidolia
Author: Cyril Matthey-Doret
Author-email: cyril.matthey-doret@pasteur.fr
License: MIT
Description: pareidolia
        ==========
        
        .. image:: https://img.shields.io/pypi/v/pareidolia.svg
            :target: https://pypi.python.org/pypi/pareidolia
            :alt: Latest PyPI version
        
        .. image:: https://travis-ci.com/cmdoret/pareidolia.png
           :target: https://travis-ci.com/cmdoret/pareidolia
           :alt: Latest Travis CI build status
        
        .. image:: https://codecov.io/gh/cmdoret/pareidolia/branch/master/graph/badge.svg
          :target: https://codecov.io/gh/cmdoret/pareidolia
        
        Multi-sample change detection in Hi-C patterns
        
        Pareidolia is a toolkit for detecting changes in pattern intensities from Hi-C maps. It can be used to compare samples from different conditions and use multiple replicates to improve results. 
        
        This toolkit exploits chromosight's correlation maps, allowing the same method to detect changes in different Hi-C patterns (e.g. loops or borders).
        
        Usage
        -----
        
        The api is currently a WIP and will be exposed through a command line interface in the future.
        
        Installation
        ------------
        
        Pareidolia is available on Pypi and can be installed using:
        
        .. code:: bash
        
          pip3 install --user pareidolia
        
        
        
Platform: UNKNOWN
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Operating System :: OS Independent
