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.gitignore
CONTRIBUTING.md
Dockerfile
HISTORY
LICENSE
MANIFEST.in
Makefile
README.md
docker-compose.yml
seqlink
settings.ini
setup.py
.github/workflows/main.yml
SEQLinkage/Core.py
SEQLinkage/Main.py
SEQLinkage/Plot.py
SEQLinkage/Runner.py
SEQLinkage/Utils.py
SEQLinkage/__init__.py
SEQLinkage/_nbdev.py
SEQLinkage/seqlink.py
SEQLinkage.egg-info/PKG-INFO
SEQLinkage.egg-info/SOURCES.txt
SEQLinkage.egg-info/dependency_links.txt
SEQLinkage.egg-info/entry_points.txt
SEQLinkage.egg-info/not-zip-safe
SEQLinkage.egg-info/requires.txt
SEQLinkage.egg-info/top_level.txt
data/README.md
data/genemap.hg19.txt
data/genemap.hg38.txt
data/bin/makeped
data/bin/mlink
data/bin/pedcheck
data/bin/unknown
data/genemap/genemap.ipynb
data/genemap/genetic_pos_searcher.py
docs/.gitignore
docs/ADFam-Copy1.html
docs/ADFam.html
docs/Core.html
docs/Create_MWE.html
docs/Gemfile
docs/Gemfile.lock
docs/Main.html
docs/Runner.html
docs/Utils.html
docs/_config.yml
docs/debug_info.html
docs/feed.xml
docs/index.html
docs/plotped.html
docs/sidebar.json
docs/sitemap.xml
docs/_data/topnav.yml
docs/_data/sidebars/home_sidebar.yml
nbs/00_Core.ipynb
nbs/01_Runner.ipynb
nbs/02_Utils.ipynb
nbs/04_Main.ipynb
nbs/05_ADFam.ipynb
nbs/06_Create_MWE.ipynb
nbs/07_plotped.ipynb
nbs/debug_info.ipynb
nbs/index.ipynb
test/Makefile
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test/DefaultData/test.vcf.gz
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