Metadata-Version: 1.2
Name: pybnf
Version: 1.1.2
Summary: An application for parallel fitting of BioNetGen and SBML models using metaheuristics
Home-page: UNKNOWN
Author: Eshan Mitra, Ryan Suderman, Alex Ionkov
License: UNKNOWN
Description: ![alt text](docs/Logo1.png "PyBioNetFit")
        
        PyBioNetFit (PyBNF) is a general-purpose program for parameterizing biological models specified using the BioNetGen
        rule-based modeling language (BNGL) or the Systems Biology Markup Language (SBML). PyBioNetFit offers a suite of
        parallelized metaheuristic algorithms (differential evolution, particle swarm optimization, scatter search) for
        parameter optimization. In addition to model parameterization, PyBNF supports uncertainty quantification by
        bootstrapping or Bayesian approaches, and model checking. PyBNF includes the Biological Property Specification Language
        (BPSL) for defining qualitative data for use in parameterization or checking. It runs on most Linux and macOS
        workstations as well on computing clusters.
        
        For documentation, refer to [Documentation_PyBioNetFit.pdf](Documentation_PyBioNetFit.pdf) or the online documentation at <https://pybnf.readthedocs.io/en/latest/>.
        
        PyBioNetFit is released under the BSD-3 license. For more information, refer to the
        [LICENSE](LICENSE). LANL code designation: C18062
        
Platform: UNKNOWN
Requires-Python: >=3.5
