Metadata-Version: 2.3
Name: pandasaurus
Version: 0.3.9
Summary: Supporting simple queries over ontology annotations in dataframes, using UberGraph queries.
License: http://www.apache.org/licenses/LICENSE-2.0
Author: Ismail Ugur Bayindir
Author-email: ugur@ebi.ac.uk
Requires-Python: >=3.9,<4.0
Classifier: License :: Other/Proprietary License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.13
Provides-Extra: docs
Requires-Dist: oaklib (>=0.6.23,<0.7.0)
Requires-Dist: pandas (>=2.0.1,<3.0.0)
Requires-Dist: rdflib (>=6.3.2,<7.0.0)
Requires-Dist: sphinx (>=7.2.6,<8.0.0) ; extra == "docs"
Requires-Dist: sphinx-copybutton (>=0.5.2,<0.6.0) ; extra == "docs"
Requires-Dist: sphinx-rtd-theme (>=1.3.0,<2.0.0) ; extra == "docs"
Description-Content-Type: text/markdown

# Pandasaurus

<img src="https://user-images.githubusercontent.com/112839/227489878-d253c381-75fd-4e92-b851-2b36df0fc5ed.png" width=100>

STATUS: BETA

A python library supporting simple queries over ontology annotations in dataframes, using UberGraph queries.

The aim for now is to keep this as a very simple independent Python lib avoiding any complex dependencies.

With the basic library in place, the first planned use for this is as a base for a library that provides simple enrichement and querability to AnnData Cell X Gene matrices following the [CZ single cell curation standard](https://github.com/chanzuckerberg/single-cell-curation/blob/main/schema/3.0.0/schema.md).

