biopandas
biopython
bioservices
matplotlib>=3.4.3
multipledispatch
networkx
numpy
pandas
plotly
pydantic
pyyaml<6.*,>=5.1
scikit-learn
scipy
tqdm
typing_extensions
wget
xarray

[all]
hypothesis
pycodestyle
pandoc
pydocstyle
furo
nbsphinx-link
nbstripout
pytest-xdist
flake8
nbsphinx
isort
sphinx_rtd_theme
pytest-cov
pre-commit
nbval
sphinx
interrogate
pytest
black

[dev]
black
flake8
furo
hypothesis
interrogate
isort
nbsphinx
nbsphinx-link
sphinx_rtd_theme
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist
sphinx

[extras]
black
flake8
furo
hypothesis
interrogate
isort
nbsphinx
nbsphinx-link
sphinx_rtd_theme
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist
sphinx
