Metadata-Version: 2.1
Name: DNBC4tools
Version: 2.0.5
Summary: DNBelabC4 scRNA QC pipeline
Home-page: https://github.com/MGI-tech-bioinformatics/DNBelab_C_Series_HT_scRNA-analysis-software
Author: lishuangshuang3
Author-email: lishuangshuang3@mgi-tech.com
License: MIT
Description: # DNBelab_C_Series_HT_scRNA-analysis-software
        An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets
        ## Introduction
        - **Propose**
          - An open source and flexible pipeline to analyze DNBelab C Series<sup>TM</sup> single-cell RNA datasets. 
        - **Language**
          - Python3(>=3.8.*),R scripts
        - **Hardware/Software requirements** 
          - x86-64 compatible processors.
          - require at least 50GB of RAM and 4 CPU. 
          - centos 7.x 64-bit operating system (Linux kernel 3.10.0, compatible with higher software and hardware configuration). 
        
        ## Directory contents
        - **DNBC4tools**   config, software and script directories
        - **doc**   Instruction for use
        - **example** Example of use the pipline
        - **scripts**    Miscellaneous scripts
        - **wdl**  WDL pipeline
        
        ## Installation
        installation manual [here](./doc/installation.md)
        
        ## Database
        Create database manual [here](./doc/database.md)
        ## Start
        **WDL version: Customize the config file, use wdl to analysis**
        - **[WDL](./doc/wdl/start.md)**
        
        **Command line version: Using the DNBC4tools command line**
        - **[DNBC4tools](./doc/DNBC4tools/start.md)**
        
        **Docker**
        - **[Docker](./doc/docker/start.md)**
Platform: Linux
Requires-Python: >=3.8.*
Description-Content-Type: text/markdown
