README.md
setup.py
bin/__init__.py
bin/adapters.py
bin/cpp_function_wrappers.py
bin/createGeneRef
bin/misc.py
bin/nanopore_read.py
bin/porechop-runner.py
bin/porechop.py
bin/version.py
bin/TH/TideHunter
bin/TRF/trf
circfull/DNSC.py
circfull/DNSC_getNovo.py
circfull/DNSC_novoCluster.py
circfull/RG.py
circfull/RG_adjExplainNormal.py
circfull/RG_adjFL.py
circfull/RG_annotateNormal.py
circfull/RG_circFL_output.py
circfull/RG_circSeq.py
circfull/RG_constructFL.py
circfull/RG_detectBS.py
circfull/RG_detectBS_fusion1.py
circfull/RG_detectBS_fusion2.py
circfull/RG_detectBS_old.py
circfull/RG_explainFL.py
circfull/RG_filterBS.py
circfull/RG_filterBS_fusion1.py
circfull/RG_filterBS_fusion2.py
circfull/RG_filterFL.py
circfull/RG_filterFL_old.py
circfull/RG_filterOut.py
circfull/RG_fusion1AdjFL.py
circfull/RG_fusion1CombinFL.py
circfull/RG_fusion1ConstructFL.py
circfull/RG_fusion2AdjFL.py
circfull/RG_fusion2CombinFL.py
circfull/RG_fusion2ConstructFL.py
circfull/RG_fusionGeneric.py
circfull/__init__.py
circfull/annoFL.py
circfull/cRG.py
circfull/circFL_main.py
circfull/geneExp.py
circfull/genericFun.py
circfull/mRG.py
circfull/mRG_merge.py
circfull/sRG.py
circfull/strand.py
circfull/strand_createStrandFq.py
circfull/strand_createStrandFq_old.py
circfull/strand_identifyStrand.py
circfull/strand_judgeStrand.py
circfull/strand_predictStrand.py
circfull/var.py
circfull/var_getVar.py
circfull/version.py
circfull.egg-info/PKG-INFO
circfull.egg-info/SOURCES.txt
circfull.egg-info/dependency_links.txt
circfull.egg-info/entry_points.txt
circfull.egg-info/requires.txt
circfull.egg-info/top_level.txt