pandas<2.0.0
biopandas==0.5.0.dev0
biopython
bioservices>=1.10.0
deepdiff
loguru
matplotlib>=3.4.3
multipledispatch
networkx
numpy<1.24.0
pandas
plotly
pydantic
rich
rich-click
seaborn
pyyaml<6.0,>=5.1
scikit-learn
scipy>=1.8
tqdm
typing_extensions==4.5.0
wget
xarray
jaxtyping

[all]
isort
pytest
pandoc
black
nbstripout
pre-commit
pydocstyle
pytest-cov
pytest-xdist
nbval
flake8
interrogate
hypothesis
pycodestyle

[dev]
black
flake8
hypothesis
interrogate
isort
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist

[extras]
black
flake8
hypothesis
interrogate
isort
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist
