LICENSE
README.md
pyproject.toml
src/_cli.py
src/analysis/__init__.py
src/analysis/concat_tables.py
src/analysis/multicompartment_to_macro.py
src/analysis/seg_groups.py
src/analysis/segmentation_refinement.py
src/analysis/solute_quantification.py
src/analysis/visualize_compartment_difference.py
src/analysis/visualize_differences.py
src/brainmeshing/__init__.py
src/brainmeshing/_cli.py
src/brainmeshing/mesh_generation.py
src/brainmeshing/utils.py
src/brainmeshing/ventricles.py
src/brainmeshing/white_gray_separation.py
src/dti/__init__.py
src/dti/_cli.py
src/dti/clean_dti_data.py
src/dti/dtifit.py
src/dti/eddy.py
src/dti/reslice_dti.py
src/dti/topup.py
src/dti/utils.py
src/gmri2fem/__init__.py
src/gmri2fem/_cli.py
src/gmri2fem/concentration.py
src/gmri2fem/csf_segmentation.py
src/gmri2fem/hybrid_t1map.py
src/gmri2fem/ll_dicom.py
src/gmri2fem/looklocker_t1map.py
src/gmri2fem/masking.py
src/gmri2fem/mixed_curve_fit.py
src/gmri2fem/mixed_dicom.py
src/gmri2fem/mixed_t1map.py
src/gmri2fem/orbital_refroi.py
src/gmri2fem/plotting.py
src/gmri2fem/regionwise_statistics.py
src/gmri2fem/reslice_4d.py
src/gmri2fem/segment_tools.py
src/gmri2fem/segmentation_groups.py
src/gmri2fem/segmentation_refinement.py
src/gmri2fem/t1_weighted.py
src/gmri2fem/t1maps.py
src/gmri2fem/utils.py
src/gmri2fem/visualization.py
src/gmri2fem.egg-info/PKG-INFO
src/gmri2fem.egg-info/SOURCES.txt
src/gmri2fem.egg-info/dependency_links.txt
src/gmri2fem.egg-info/entry_points.txt
src/gmri2fem.egg-info/requires.txt
src/gmri2fem.egg-info/top_level.txt
src/i2m/__init__.py
src/i2m/_cli.py
src/i2m/collect_mesh_data.py
src/i2m/concentrations_to_mesh.py
src/i2m/dti_data_to_mesh.py
src/i2m/mesh_segments.py
src/i2m/mri2fenics.py
src/i2m/vtk2mri.py
src/i2m/vtk_converter.py