Metadata-Version: 2.1
Name: md-harmonize
Version: 1.0.3
Summary: Harmonize compounds and reactions across public metabolic databases.
License: A modified Clear BSD License
        
        Copyright (c) 2022, Huan Jin, Hunter N.B. Moseley
        All rights reserved.
        
        Redistribution and use in source and binary forms, with or without
        modification, are permitted (subject to the limitations in the disclaimer
        below) provided that the following conditions are met:
        
        * Redistributions of source code must retain the above copyright notice, this
          list of conditions and the following disclaimer.
        
        * Redistributions in binary form must reproduce the above copyright notice,
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          and/or other materials provided with the distribution.
        
        * Neither the name of the copyright holder nor the names of its contributors may be used
          to endorse or promote products derived from this software without specific
          prior written permission.
        
        * If the source code is used in a published work, then proper citation of the source
          code must be included with the published work.
        
        NO EXPRESS OR IMPLIED LICENSES TO ANY PARTY'S PATENT RIGHTS ARE GRANTED BY THIS
        LICENSE. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
        "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
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        ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
        LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
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Project-URL: Homepage, https://github.com/MoseleyBioinformaticsLab/md_harmonize
Project-URL: Documentation, https://moseleybioinformaticslab.github.io/md_harmonize/
Project-URL: GitHub, https://github.com/MoseleyBioinformaticsLab/md_harmonize
Keywords: metabolic database,harmonization
Classifier: Environment :: Console
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Software Development :: Libraries :: Python Modules
Requires-Python: >=3.7
Description-Content-Type: text/x-rst
License-File: LICENSE

md_harmonize
============

.. image:: https://img.shields.io/pypi/v/md_harmonize.svg
   :target: https://pypi.org/project/md-harmonize/
   :alt: Current library version

.. image:: https://img.shields.io/pypi/pyversions/md_harmonize.svg
   :target: https://pypi.org/project/md-harmonize
   :alt: Supported Python versions


md_harmonize package provides facilities for creation and harmonization of compounds and reactions.

Citation
~~~~~~~~

Please cite the GitHub repository until our manuscript is accepted for
publication: https://github.com/MoseleyBioinformaticsLab/md_harmonize.git

Installation
~~~~~~~~~~~~

md_harmonize runs under Python 3.7+ and is available through python3-pip.
Install via pip or clone the git repo and install the following dependencies and
you are ready to go!

Install on Linux
~~~~~~~~~~~~~~~~

Pip installation
----------------
        
.. code:: bash

   python3 -m pip install md-harmonize

Note: 
   Please add ~/.local/bin/ to the environmental PATH variant in bash_profile if you install the package with --user.
   
   python3-devel  is required for package installation. 

GitHub Package installation
---------------------------

.. code:: bash

   git clone git@github.com:MoseleyBioinformaticsLab/md_harmonize.git

License
~~~~~~~

Made available under the terms of The modified Clear BSD License. See full license in LICENSE_.

Authors
~~~~~~~

* **Huan Jin**
* **Hunter N.B. Moseley**


.. _LICENSE: https://github.com/MoseleyBioinformaticsLab/MDH/blob/master/LICENSE

