Metadata-Version: 2.1
Name: ATACFragQC
Version: 0.1.7
Summary: Fragment Quality Control for ATAC-seq
Home-page: https://github.com/0CBH0/ATACFragQC
Author: 0CBH0
Author-email: maodatou88@163.com
License: MIT
Description: # ATACFragQC
        
        The Python toolkits designed to control the fragment quality of Bulk/SingCell ATAC-seq.
        
        ## Installation
        ~~~
        python3 -m pip install ATACFragQC
        ~~~
        
        ## Usage
        ~~~
        # Basic usage
        ATACFragQC [options] -i <input.bam> -r <reference.gtf>
        
        # For more information
        ATACFragQC -h
        ~~~
        
        ## Features
        * The distrubution of fragments in chromosomes
        * The distrubution of fragment lengths
        * The distrubution of fragments around transcription start sites (TSSs)
        * Other feature would be supported in the future ...
        
        ## Overview
        ![Overview of ATACFragQC](https://raw.githubusercontent.com/0CBH0/ATACFragQC/main/Images/MCBULK_qc.png)
        
Platform: UNKNOWN
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 3
Requires-Python: >=3.6
Description-Content-Type: text/markdown
