Metadata-Version: 2.1
Name: mbirjax
Version: 0.4.3
Summary: High-performance tomographic reconstruction
Author-email: MBIRJAX development team <buzzard@purdue.edu>
License: BSD 3-Clause License
        
        Copyright (c) 2024, Charles A. Bouman and Gregery T. Buzzard
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Project-URL: homepage, https://mbirjax.readthedocs.io
Project-URL: source, https://github.com/cabouman/mbirjax
Keywords: tomography,tomographic reconstruction,computed tomography
Classifier: Programming Language :: Python :: 3
Classifier: Topic :: Scientific/Engineering :: Information Analysis
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.9
Description-Content-Type: text/x-rst
License-File: LICENSE
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Requires-Dist: setuptools
Requires-Dist: jax
Requires-Dist: jaxlib
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Provides-Extra: test
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.. docs-include-ref

MBIRJAX
=======

Model-Based Iterative Reconstruction (MBIR) for tomographic reconstruction that is based on the `JAX <https://github.com/google/jax>`__ library.
Full documentation is available at https://mbirjax.readthedocs.io .

Installing from PyPI
--------------------

    .. code-block::

        pip install mbirjax

Installing from Source
----------------------

1. *Clone the repository:*

    .. code-block::

        git clone git@github.com:cabouman/mbirjax.git

2. Install the conda environment and package

    a. Option 1: Clean install using dev_scripts - We provide bash scripts that will do a clean install of MBIRJAX in a new conda environment using the commands:

        .. code-block::

            cd dev_scripts
            source clean_install_all.sh

    b. Option 2: Manual install - You can also manually install MBIRJAX from the main directory of the repository with the following commands:

        .. code-block::

            conda create --name mbirjax python=3.10
            conda activate mbirjax
            pip install -r requirements.txt
            pip install .

Running Demo(s)
---------------

Run any of the available demo scripts with something like the following:

    .. code-block::

        python demo/<demo_file>.py

