.gitignore
CHANGELOG.md
LICENSE
MANIFEST.in
README.md
setup.py
bbknn/__init__.py
bbknn.egg-info/PKG-INFO
bbknn.egg-info/SOURCES.txt
bbknn.egg-info/dependency_links.txt
bbknn.egg-info/requires.txt
bbknn.egg-info/top_level.txt
docs/Makefile
docs/conf.py
docs/index.rst
examples/README.md
examples/benchmark.ipynb
examples/benchmark2.ipynb
examples/benchmark3-new-R-methods.ipynb
examples/demo.ipynb
examples/mouse-harmony.ipynb
examples/mouse.ipynb
examples/simulation.ipynb
examples/benchmark-times/annoy.txt
examples/benchmark-times/bbknn.txt
examples/benchmark-times/cca.txt
examples/benchmark-times/conos.txt
examples/benchmark-times/faiss.txt
examples/benchmark-times/harmony.txt
examples/benchmark-times/mnn.txt
examples/benchmark-times/scanorama.txt
examples/benchmark-times/seurat3.txt
figures/batch1.png
figures/batch2.png