README.md
setup.py
smallrnaseq/DEanalysis.R
smallrnaseq/Limma.R
smallrnaseq/__init__.py
smallrnaseq/aligners.py
smallrnaseq/analysis.py
smallrnaseq/app.py
smallrnaseq/base.py
smallrnaseq/config.py
smallrnaseq/de.py
smallrnaseq/ensembl.py
smallrnaseq/mirdeep2.py
smallrnaseq/novel.py
smallrnaseq/plotting.py
smallrnaseq/srnabench.py
smallrnaseq/tests.py
smallrnaseq/trf.py
smallrnaseq/utils.py
smallrnaseq.egg-info/PKG-INFO
smallrnaseq.egg-info/SOURCES.txt
smallrnaseq.egg-info/dependency_links.txt
smallrnaseq.egg-info/entry_points.txt
smallrnaseq.egg-info/requires.txt
smallrnaseq.egg-info/top_level.txt
smallrnaseq/data/bosTau8-tRNAs.fa
smallrnaseq/data/bosTau8-tRNAs.log
smallrnaseq/data/bovine_plasma_sample.fastq
smallrnaseq/data/bovine_serum_sample.fastq
smallrnaseq/data/bovine_serum_sample_collapsed.csv
smallrnaseq/data/bovine_serum_sample_collapsed.fa
smallrnaseq/data/ensembl_names.csv
smallrnaseq/data/miRBase_all.csv
smallrnaseq/data/miRBase_all_old.csv
smallrnaseq/data/premirna_model.joblib
smallrnaseq/data/styles.css
smallrnaseq/data/test.sam
smallrnaseq/data/test_collapsed.fa
smallrnaseq/data/test_counts.csv
smallrnaseq/data/training_negatives.csv
smallrnaseq/data/training_positives.csv
smallrnaseq/data/de_example/mirbase_mature_counts.csv
smallrnaseq/data/de_example/phenodata.txt