Metadata-Version: 2.1
Name: metagentools
Version: 0.0.3
Summary: Set of tools used for metagenomics research project
Home-page: https://github.com/vtecftwy/metagentools
Author: Charlier
Author-email: github@procurasia.com
License: Apache Software License 2.0
Keywords: nbdev jupyter notebook python
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.10
Classifier: License :: OSI Approved :: Apache Software License
Requires-Python: >=3.10
Description-Content-Type: text/markdown
Provides-Extra: dev
License-File: LICENSE

metagentools
================

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This repository includes the code developed as part of our metagenomics
project. The code is structured into general code and submodules to
cover the various aspects of the project:

General utility code to be used across the project: 1. `art`: use
ART-ILLUMINA read simulator package from a jupyter notebook 1. `wandb`:
use to open, retrieve, use WandB runs and artifacts accross the
project 1. `core`: general code (WIP)

Submodules: 1. `cnn_virus` - `architecture` - `data` - `utils`

This is a work in progress, and some functions or modules may be broken.
We cannot provide support. Use at your own risk.

Installation: - `pip install metagentools` for the stable version

- `pip install git+https://github.com/vtecftwy/metagentools.git@main`
  for the latest committed version

Requirements: - python 3.10 is required for this package
