Metadata-Version: 2.1
Name: dsne
Version: 0.1.6
Summary: DSNE algorithms
Home-page: https://github.com/songtingstone/dsne
Maintainer: Songting Shi
Maintainer-email: songtingstone@gmail.com
License: Apache License, Version 2.0
Description: # DSNE
        Visualizing Data Velocity using DSNE. [Preprint](https://arxiv.org/abs/2103.08509). 
        Python library containing DSNE algorithms. 
        ![png](./examples/data/Pancreas/scvelo_pancreas_dsne_umap_stream.png)
        ## Installation
        
        ## Requirements
        
        - [cblas](http://www.netlib.org/blas/) or [openblas](https://github.com/xianyi/OpenBLAS).
        Tested version is v0.2.5 and v0.2.6 (not necessary for OSX).
        
        From Github:
        
        ```
        git clone https://github.com/songtingstone/dsne
        cd dsne/
        make cleanpackage 
        ```
        
        From PyPI:
        
        ```
        pip install dsne
        ```
        
        From conda:
        
        ```
        conda install -c maxibor dsne
        ```
        
        ## Usage
        
        Basic usage:
        
        ```python
        from dsne import DSNE
        W = DSNE(X,V,Y)
        ```
        
        ### Examples
        
        - [Simulation with Exact Velocity Embeddings](https://github.com/songtingstone/dsne/examples/exact_simulation.py)
        - [Simulation with Approximate Velocity Embeddings](https://github.com/songtingstone/dsne/examples/unexact_simulation.py)
        - [Pancreas](https://github.com/songtingstone/dsne/examples/Pancreas.py) 
        ## Algorithms
        
        ### DSNE 
        Direction Stochastic Nearnest Neighbor Embedding of Velocity 
        
        
Keywords: DSNE,algorithms,numpy,cython
Platform: UNKNOWN
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Requires-Python: >=3.6
Description-Content-Type: text/markdown
Provides-Extra: test
Provides-Extra: dev
