LICENSE
README.md
pyproject.toml
setup.cfg
bin/gpas-build-uploadcsv.py
bin/gpas-synreads-covid-analyse.py
bin/gpas-synreads-covid-create.py
bin/gpas-synreads-tb-create.py
bin/gpas-test-fn4.py
gpas_testing/__init__.py
gpas_testing/common.py
gpas_testing/pango_definitions.py
gpas_testing/variant_definitions.py
gpas_testing.egg-info/PKG-INFO
gpas_testing.egg-info/SOURCES.txt
gpas_testing.egg-info/dependency_links.txt
gpas_testing.egg-info/not-zip-safe
gpas_testing.egg-info/requires.txt
gpas_testing.egg-info/top_level.txt
gpas_testing/data/MN908947.3.gbk
gpas_testing/data/NC_000962.3.gbk.gz
gpas_testing/data/NC_045512.2.gbk
gpas_testing/data/convert-primer-tsv.py
gpas_testing/data/cov-lineages.csv
gpas_testing/data/covid-ampliseq-v1.amplicons.csv
gpas_testing/data/covid-ampliseq-v1.vwf.tsv
gpas_testing/data/covid-artic-v3.amplicons.csv
gpas_testing/data/covid-artic-v3.json
gpas_testing/data/covid-artic-v3.primers.csv
gpas_testing/data/covid-artic-v3.vwf.tsv
gpas_testing/data/covid-artic-v4.amplicons.csv
gpas_testing/data/covid-artic-v4.primers.csv
gpas_testing/data/covid-artic-v4.vwf.tsv
gpas_testing/data/covid-midnight-1200.amplicons.csv
gpas_testing/data/covid-midnight-1200.primers.csv
gpas_testing/data/covid-midnight-1200.vwf.tsv
gpas_testing/data/tags.txt
gpas_testing/data/ampliseq/SARS-CoV-2.dna_manifest.20200408.bed
gpas_testing/data/ampliseq/SARS-CoV-2.dna_manifest.20200408.probes.txt
gpas_testing/data/ampliseq/SARS-CoV-2.dna_manifest.20200408.targets.txt
gpas_testing/data/ampliseq/SARS-CoV-2.dna_manifest.20200408.txt
gpas_testing/data/ampliseq/deciphering-ampliseq.ipynb