Metadata-Version: 2.1
Name: stereopy
Version: 0.6.0
Summary: Spatial transcriptomic analysis in python.
Home-page: https://github.com/BGIResearch/stereopy
Author: BGIResearch
Author-email: qiuping1@genomics.cn
License: UNKNOWN
Platform: UNKNOWN
Classifier: Natural Language :: English
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 3
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Visualization
Requires-Python: >=3.7
Description-Content-Type: text/markdown
Provides-Extra: visualization
Provides-Extra: doc
Provides-Extra: test
License-File: LICENSE

[![stars](https://img.shields.io/github/stars/BGIResearch/stereopy?logo=GitHub&color=yellow)](https://img.shields.io/github/stars/BGIResearch/stereopy) 
[![pypi](https://img.shields.io/pypi/v/stereopy)](https://pypi.org/project/stereopy/)
[![downloads](https://static.pepy.tech/personalized-badge/stereopy?period=total&units=international_system&left_color=grey&right_color=blue&left_text=downloads)](https://pepy.tech/project/stereopy)
[![docs](https://img.shields.io/static/v1?label=docs&message=stereopy&color=green)](https://stereopy.readthedocs.io/en/latest/index.html)

## **Stereopy**: Spatial transcriptomics analysis in Python

[Installation](https://stereopy.readthedocs.io/en/latest/General/Installation.html) - 
[Quick start](https://stereopy.readthedocs.io/en/latest/Tutorials/quick_start.html) - 
[Documentation](https://stereopy.readthedocs.io/en/latest/index.html) - 
[API](https://stereopy.readthedocs.io/en/latest/api/index.html)

<img src="https://github.com/BGIResearch/stereopy/blob/main/docs/source/_static/workflow.png" width="60%" height="70%">

[comment]: <> (![Stereopy]&#40;./docs/source/_static/stereopy.PNG&#41;)

Stereopy is a tool for data mining and visualization of spatial transcriptomics. 
It provides a series of analysis of spatial omics, and some tissue image related analysis  will be added later. 
As the first version may not fully meet the requirements, we will keep on improving it's performance and calculation 
efficiency, and adding more analyses.

## Discussion 
Please use github issue tracker to report coding related [issues](https://github.com/BGIResearch/stereopy/issues) of stereopy.

## Contribution 
Contributions to stereopy are highly welcome! The contributing guide will be updated later.


