Metadata-Version: 2.1
Name: altocumulus
Version: 1.0.0
Summary: Command line utilities for running workflows
Home-page: https://github.com/klarman-cell-observatory/altocumulus
Author: Cumulus Team
Author-email: cumulus@broadinstitute.org
License: BSD license
Description: # altocumulus
        
        Command line utilities for running workflows on [Terra](https://app.terra.bio/) including:
        
        - Add/update methods in Terra.
        - Generate a Terra WDL input.json stub.
        - Run a Terra method. Replace local file paths with workspace Google Cloud bucket URLs. Automatically 
            upload referenced files to workspace Google bucket.
        - Bulk add/delete methods in Terra. 
        - Parse monitoring log files to determine optimal instance type and disk space.
        
        
        ## Installation
        
            git clone https://github.com/klarman-cell-observatory/altocumulus.git
            cd altocumulus
            pip install -e .
        
        ## Usage
        - Type `alto` for a list of all commands.
        
Keywords: Terra
Platform: UNKNOWN
Classifier: License :: OSI Approved :: BSD License
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >= 3
Description-Content-Type: text/markdown
