Metadata-Version: 2.1
Name: chafer
Version: 0.3
Summary: CHArge artiFact supprEssion tool for scanning electRon microscope images
Home-page: https://github.com/rosalindfranklininstitute/chafer
Author: Luis Perdigao
Author-email: luis.perdigao@rfi.ac.uk
License: Apache License, Version 2.0
Classifier: Development Status :: 4 - Beta 
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.8
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: MacOS
Classifier: Operating System :: POSIX :: Linux
Classifier: Topic :: Scientific/Engineering :: Image Processing
Description-Content-Type: text/markdown
License-File: LICENSE

# chafer
**CHA**rge arti**F**act suppr**E**ssion tool for scanning elect**R**on microscope images

Contains:

- functions for upscaling 3D data along X and Y axis, and preserving along Z axis
- unet (fastai) predictor - requires model file
- charge artefact suppression filter for 2D and 3D SEM images - requires respective charge centres to be segmented in a separate file
