LICENSE.txt
MANIFEST.in
README.md
requirements.txt
setup.cfg
setup.py
bnpy/HModel.py
bnpy/Run.py
bnpy/__init__.py
bnpy.egg-info/PKG-INFO
bnpy.egg-info/SOURCES.txt
bnpy.egg-info/dependency_links.txt
bnpy.egg-info/not-zip-safe
bnpy.egg-info/requires.txt
bnpy.egg-info/top_level.txt
bnpy/allocmodel/AllocModel.py
bnpy/allocmodel/__init__.py
bnpy/allocmodel/hmm/FiniteHMM.py
bnpy/allocmodel/hmm/HDPHMM.py
bnpy/allocmodel/hmm/HDPHMMUtil.py
bnpy/allocmodel/hmm/HMMUtil.py
bnpy/allocmodel/hmm/__init__.py
bnpy/allocmodel/hmm/lib/FwdBwdRowMajor.cpp
bnpy/allocmodel/hmm/lib/LibFwdBwd.py
bnpy/allocmodel/hmm/lib/__init__.py
bnpy/allocmodel/mix/DPMixtureModel.py
bnpy/allocmodel/mix/DPMixtureRestrictedLocalStep.py
bnpy/allocmodel/mix/FiniteMixtureModel.py
bnpy/allocmodel/mix/__init__.py
bnpy/allocmodel/relational/FiniteAssortativeMMSB.py
bnpy/allocmodel/relational/FiniteMMSB.py
bnpy/allocmodel/relational/FiniteSMSB.py
bnpy/allocmodel/relational/HDPAssortativeMMSB.py
bnpy/allocmodel/relational/HDPMMSB.py
bnpy/allocmodel/relational/__init__.py
bnpy/allocmodel/topics/BetterLocalStep.py
bnpy/allocmodel/topics/FiniteTopicModel.py
bnpy/allocmodel/topics/HDPTopicModel.py
bnpy/allocmodel/topics/HDPTopicRestrictedLocalStep.py
bnpy/allocmodel/topics/HDPTopicRestrictedLocalStep2.py
bnpy/allocmodel/topics/HDPTopicUtil.py
bnpy/allocmodel/topics/LocalStepLogger.py
bnpy/allocmodel/topics/LocalStepManyDocs.py
bnpy/allocmodel/topics/LocalStepSingleDoc.py
bnpy/allocmodel/topics/LocalStepSingleDocSimpler.py
bnpy/allocmodel/topics/OptimizerRhoOmega.py
bnpy/allocmodel/topics/OptimizerRhoOmegaBetter.py
bnpy/allocmodel/topics/__init__.py
bnpy/allocmodel/tree/__init__.py
bnpy/birthmove/BCleanup.py
bnpy/birthmove/BCreateManyProposals.py
bnpy/birthmove/BCreateOneProposal.py
bnpy/birthmove/BLogger.py
bnpy/birthmove/BPlanner.py
bnpy/birthmove/BRestrictedLocalStep.py
bnpy/birthmove/BirthProposalError.py
bnpy/birthmove/TryBirth.py
bnpy/birthmove/__init__.py
bnpy/callbacks/CBCalcHeldoutMetricsTopicModel.py
bnpy/callbacks/HeldoutMetricsLogger.py
bnpy/callbacks/InferHeldoutTopics.py
bnpy/callbacks/__init__.py
bnpy/config/__init__.py
bnpy/config/allocmodel.conf
bnpy/config/init.conf
bnpy/config/learnalg.conf
bnpy/config/localstep.conf
bnpy/config/moves.conf
bnpy/config/numeric.conf
bnpy/config/obsmodel.conf
bnpy/config/onlinedata.conf
bnpy/config/output.conf
bnpy/data/BagOfWordsData.py
bnpy/data/DataIterator.py
bnpy/data/DataIteratorFromDisk.py
bnpy/data/DataObj.py
bnpy/data/GraphXData.py
bnpy/data/GroupXData.py
bnpy/data/SeqOfWordsData.py
bnpy/data/XData.py
bnpy/data/__init__.py
bnpy/datasets/README.md
bnpy/datasets/AsteriskK8/x_dataset.csv
bnpy/datasets/AsteriskK8/x_dataset.npz
bnpy/datasets/bars_many_per_doc/dataset.npz
bnpy/datasets/bars_one_per_doc/dataset.npz
bnpy/datasets/faithful/faithful.csv
bnpy/datasets/mocap6/dataset.npz
bnpy/datasets/we8there/raw/dataset.npz
bnpy/datasets/we8there/raw/x_csc_colnames.txt
bnpy/datasets/we8there/raw/x_csc_data.txt
bnpy/datasets/we8there/raw/x_csc_indices.txt
bnpy/datasets/we8there/raw/x_csc_indptr.txt
bnpy/datasets/we8there/raw/x_csc_rownames.txt
bnpy/datasets/we8there/raw/x_csc_shape.txt
bnpy/datasets/we8there/raw/y_dense.txt
bnpy/datasets/we8there/raw/y_dense_colnames.txt
bnpy/datasets/we8there/raw/y_dense_rownames.txt
bnpy/datasets/we8there/split/X_colnames.txt
bnpy/datasets/we8there/split/X_csr_test.npz
bnpy/datasets/we8there/split/X_csr_train.npz
bnpy/datasets/we8there/split/X_csr_valid.npz
bnpy/datasets/we8there/split/Y_colnames.txt
bnpy/datasets/we8there/split/patient_ids.txt
bnpy/datasets/wiki/vocab.txt
bnpy/datasets/zzz_unsupported/rawData/sampson_labels.txt
bnpy/datasets/zzz_unsupported/rawData/AnimalAttrib/README-attributes.txt
bnpy/datasets/zzz_unsupported/rawData/AnimalAttrib/classes.txt
bnpy/datasets/zzz_unsupported/rawData/AnimalAttrib/predicate-matrix-binary.txt
bnpy/datasets/zzz_unsupported/rawData/AnimalAttrib/predicates.txt
bnpy/deletemove/DLogger.py
bnpy/deletemove/DPlanner.py
bnpy/deletemove/TryDelete.py
bnpy/deletemove/__init__.py
bnpy/init/FromExistingBregman.py
bnpy/init/FromLP.py
bnpy/init/FromSaved.py
bnpy/init/FromScratchBern.py
bnpy/init/FromScratchBregman.py
bnpy/init/FromScratchBregmanMixture.py
bnpy/init/FromScratchGauss.py
bnpy/init/FromScratchMult.py
bnpy/init/FromScratchRelational.py
bnpy/init/FromTruth.py
bnpy/init/__init__.py
bnpy/ioutil/BNPYArgParser.py
bnpy/ioutil/CountReader.py
bnpy/ioutil/DataReader.py
bnpy/ioutil/ModelReader.py
bnpy/ioutil/ModelWriter.py
bnpy/ioutil/SuffStatBagIO.py
bnpy/ioutil/__init__.py
bnpy/learnalg/EMAlg.py
bnpy/learnalg/ElapsedTimeLogger.py
bnpy/learnalg/LearnAlg.py
bnpy/learnalg/MOVBAlg.py
bnpy/learnalg/MemoVBMovesAlg.py
bnpy/learnalg/SOVBAlg.py
bnpy/learnalg/VBAlg.py
bnpy/learnalg/__init__.py
bnpy/mergemove/MLogger.py
bnpy/mergemove/MPlanner.py
bnpy/mergemove/SLogger.py
bnpy/mergemove/TryMerge.py
bnpy/mergemove/__init__.py
bnpy/obsmodel/AbstractObsModel.py
bnpy/obsmodel/AutoRegGaussObsModel.py
bnpy/obsmodel/BernObsModel.py
bnpy/obsmodel/DiagGaussObsModel.py
bnpy/obsmodel/GaussObsModel.py
bnpy/obsmodel/GaussRegressYFromDiagGaussXObsModel.py
bnpy/obsmodel/GaussRegressYFromFixedXObsModel.py
bnpy/obsmodel/MultObsModel.py
bnpy/obsmodel/ZeroMeanGaussObsModel.py
bnpy/obsmodel/__init__.py
bnpy/suffstats/ParamBag.py
bnpy/suffstats/SuffStatBag.py
bnpy/suffstats/__init__.py
bnpy/util/EntropyUtil.py
bnpy/util/EntropyUtilX.c
bnpy/util/EntropyUtilX.pyx
bnpy/util/MatMultUtil.py
bnpy/util/MemoryUtil.py
bnpy/util/NumericUtil.py
bnpy/util/OptimizerForPi.py
bnpy/util/ParallelUtil.py
bnpy/util/PrettyPrintUtil.py
bnpy/util/RandUtil.py
bnpy/util/ShapeUtil.py
bnpy/util/SparseRespStatsUtil.py
bnpy/util/SparseRespUtil.py
bnpy/util/SparseRespUtilX.c
bnpy/util/SparseRespUtilX.pyx
bnpy/util/SpecialFuncUtil.py
bnpy/util/StateSeqUtil.py
bnpy/util/StickBreakUtil.py
bnpy/util/TextFileReader.py
bnpy/util/TextFileReaderX.c
bnpy/util/TextFileReaderX.pyx
bnpy/util/VerificationUtil.py
bnpy/util/__init__.py
bnpy/util/setup.py
bnpy/util/lib/LibLocalStep.py
bnpy/util/lib/LibRlogR.py
bnpy/util/lib/__init__.py
bnpy/util/lib/sparseResp/CPPLoader.py
bnpy/util/lib/sparseResp/LibLocalStepManyDocs.py
bnpy/util/lib/sparseResp/LibSparseResp.py
bnpy/util/lib/sparseResp/SparsifyRespCPPX.cpp
bnpy/util/lib/sparseResp/TopicModelLocalStepCPPX.cpp
bnpy/util/lib/sparseResp/TopicModelLocalStepManyDocsCPPX.cpp
bnpy/util/lib/sparseResp/__init__.py
bnpy/util/lib/sparseResp/fastexp.h
bnpy/viz/BarsViz.py
bnpy/viz/BernViz.py
bnpy/viz/BestJobSearcher.py
bnpy/viz/GaussViz.py
bnpy/viz/JobFilter.py
bnpy/viz/PlotComps.py
bnpy/viz/PlotCounts.py
bnpy/viz/PlotELBO.py
bnpy/viz/PlotHeldoutLik.py
bnpy/viz/PlotK.py
bnpy/viz/PlotParamComparison.py
bnpy/viz/PlotTrace.py
bnpy/viz/PlotUtil.py
bnpy/viz/PrintTopics.py
bnpy/viz/ProposalViz.py
bnpy/viz/RelationalViz.py
bnpy/viz/SequenceViz.py
bnpy/viz/TaskRanker.py
bnpy/viz/__init__.py