Metadata-Version: 2.1
Name: teUtils
Version: 0.972
Summary: Utilities for Tellurium
Home-page: http://tellurium.analogmachine.org
Author: H M Sauro, J Hellerstein
Author-email: hsauro@uw.edu
License: MIT
Description: # Utilities for Tellurium
        
        This repo includes a number of useful utilities for Tellurium users.
        Modules are described below.
        
        ## odePrint
        
        This provides a number of methods convert SBML into the equations representing the model. 
           
        ## plotting
        
        This modules contains a variety of additional plotting methods, include 3D, heatmaps for control coefficients, 
        and ascii plots.
        
        ## prettyTabular
        
        This modules provides two methods to display fluxes and concentrations in a neat tabular format.
        
        ## buildNetworks
        
        This modules provides two methods to build a linear chain of reactions using either mass-action or Michaelis-Menten
        kinetics or a random network using uniuni, unibi, biuni or bibi mass-action governed reactions. 
        
        ## fitter
        This module fits model parameters to observational data.
        
        # Installation
        1. ``cd teUtils``
        1. ``pip install tellurium``
        1. ``python setup.py install``
        
        
        # Developer Notes
        
        1. run tests as follows:
           1. change to this directory
           1. set the environment variable `PYTHONPATH` to
              the absolute path of this directory.
              - [Windows](https://www.computerhope.com/issues/ch000549.htm)
              - Linux and Mac
                - `PYTHONPATH=<current directory>`
                - `export PYTHONPATH`
           
           1. `nosetests tests`
        
        
        
Platform: UNKNOWN
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Operating System :: OS Independent
Requires-Python: >=3.6
Description-Content-Type: text/markdown
