Welcome to dandelion's documentation!
========================================

.. toctree::   
   :maxdepth: 2

   README.md

.. toctree::
   :maxdepth: 2
   :caption: Tutorial:

   notebooks/1_dandelion_preprocessing-10x_data.ipynb
   notebooks/2_dandelion_filtering-10x_data.ipynb
   notebooks/1b_dandelion_noreannotation-10x_data.ipynb   
   notebooks/3_dandelion_findingclones-10x_data.ipynb
   notebooks/1c_dandelion_scirpy.ipynb
   notebooks/4_dandelion_visualization-10x_data.ipynb
   notebooks/5_dandelion_diversity_and_mutation-10x_data.ipynb
   notebooks/0_dandelion_primer.ipynb
   notebooks/6_dandelion_running_from_R-10x_data.ipynb

.. toctree::
   :maxdepth: 2
   :caption: API:
   
   api