Metadata-Version: 2.1
Name: matplotlib-polyroi
Version: 0.1.3
Summary: Python implementation of SAIBR: a tool for performing spectral autofluorescence correction on biological images
Home-page: UNKNOWN
Author: Tom Bland
Author-email: tom_bland@hotmail.co.uk
License: CC BY 4.0
Description: # matplotlib-polyroi
        
        [![CC BY 4.0][cc-by-shield]][cc-by]
        [![PyPi version](https://badgen.net/pypi/v/matplotlib-polyroi/)](https://pypi.org/project/matplotlib-polyroi)
        [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/tsmbland/matplotlib-polyroi/HEAD?filepath=%2Fscripts/Demonstration.ipynb)
        
        
        Module for selecting polygonal ROIs on images, spline fitting and ROI expansion
        
        ## Installation
        
            pip install matplotlib-polyroi
        
        
        ## Instructions
        
        See demonstration notebook for instructions on usage.
        
        To run notebook in the cloud, click 'launch binder' above.
        
        To run on your local machine, follow these steps:
        
        &#8291;1. Clone the repository:
        
            git clone https://github.com/tsmbland/matplotlib-polyroi.git
            cd matplotlib-polyroi
        
        &#8291;2. Create conda environment:
        
            conda env create -f environment.yml
        
        &#8291;3. Activate conda environment:
        
            conda activate matplotlib-polyroi
        
        &#8291;4. Open jupyter notebook:
        
            jupyter notebook scripts/Demonstration.ipynb
        
        ## License
        
        This work is licensed under a
        [Creative Commons Attribution 4.0 International License][cc-by].
        
        [![CC BY 4.0][cc-by-image]][cc-by]
        
        [cc-by]: http://creativecommons.org/licenses/by/4.0/
        [cc-by-image]: https://i.creativecommons.org/l/by/4.0/88x31.png
        [cc-by-shield]: https://img.shields.io/badge/License-CC%20BY%204.0-lightgrey.svg
Platform: UNKNOWN
Description-Content-Type: text/markdown
