Metadata-Version: 1.2
Name: scipion-em-reliontomo
Version: 3.0.1
Summary: Plugin to use Relion programs for tomography within the Scipion framework
Home-page: https://github.com/scipion-em/scipion-em-reliontomo
Author: CNB-CSIC
Author-email: jjimenez@cnb.csic.es, scipion-users@lists.sourceforge.net
License: UNKNOWN
Project-URL: Bug Reports, https://github.com/scipion-em/scipion-em-reliontomo/issues
Project-URL: Source, https://github.com/scipion-em/scipion-em-reliontomo/
Description: =================
        Reliontomo plugin
        =================
        
        This plugin provide wrappers around several programs of `RELION <https://www3.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page>`_ software suite for its use in Tomography.
        
        Installation
        ------------
        
        You will need to use `3.0 <https://scipion-em.github.io/docs/docs/scipion-modes/how-to-install.html>`_ version of Scipion to be able to run these protocols. To install the plugin, you have two options:
        
        a) Stable version
        
           .. code-block::
        
              scipion3 installp -p scipion-em-reliontomo
        
        b) Developer's version
        
           * download repository
        
           .. code-block::
        
              git clone https://github.com/scipion-em/scipion-em-reliontomo.git
        
           * install
        
           .. code-block::
        
              scipion3 installp -p path_to_scipion-em-reliontomo --devel
        
        To check the installation, simply run one of the tests. A complete list of tests can be displayed by executing ``scipion3 tests --grep reliontomo --show``
        
        Supported versions
        ------------------
        
        Relion 3.0
        
        Protocols
        ---------
        
        * ctf 3D estimation
        * subtomogram 3D classification
        * subtomogram 3D refinement
        * subtomogram reconstruction
        
        References
        ----------
        
        1. Scheres et al., JMB, 2012 
        2. Scheres et al., JSB, 2012 
        3. Kimanius et al., eLife, 2016 
        4. Zivanov et al., eLife, 2018
        
Keywords: scipion electron-tomography cryo-em structural-biology image-processing scipion-3.0
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Programming Language :: Python :: 3
