README.md
setup.cfg
setup.py
scHiCTools/__init__.py
scHiCTools.egg-info/PKG-INFO
scHiCTools.egg-info/SOURCES.txt
scHiCTools.egg-info/dependency_links.txt
scHiCTools.egg-info/requires.txt
scHiCTools.egg-info/top_level.txt
scHiCTools/analysis/__init__.py
scHiCTools/analysis/clustering.py
scHiCTools/analysis/visualization.py
scHiCTools/embedding/__init__.py
scHiCTools/embedding/embedding.py
scHiCTools/embedding/reproducibility.py
scHiCTools/load/ContactMaps.py
scHiCTools/load/__init__.py
scHiCTools/load/cool.py
scHiCTools/load/cooler.py
scHiCTools/load/cooler_api.py
scHiCTools/load/hic_straw.py
scHiCTools/load/load_hic_file.py
scHiCTools/load/mcool_dump.py
scHiCTools/load/processing_utils.py