.gitignore
.travis.yml
LICENSE
README.md
enviroment-cuda.yml
environment_cpu.yml
setup.py
.github/workflows/main.yml
docs/Makefile
docs/make.bat
docs/source/api.rst
docs/source/conf.py
docs/source/index.rst
docs/source/installation.md
docs/source/requirements.txt
docs/source/tutorials/R_analyses.md
docs/source/tutorials/Rplot_dge_pvalue.png
docs/source/tutorials/Rplot_kbet.png
docs/source/tutorials/Rplot_volcano.png
docs/source/tutorials/atac_tutorial.ipynb
docs/source/tutorials/index.rst
docs/source/tutorials/mixed_cell_lines_tutorial.ipynb
scbean/__init__.py
scbean.egg-info/PKG-INFO
scbean.egg-info/SOURCES.txt
scbean.egg-info/dependency_links.txt
scbean.egg-info/not-zip-safe
scbean.egg-info/requires.txt
scbean.egg-info/top_level.txt
scbean/model/__init__.py
scbean/model/vipcca.py
scbean/tools/__init__.py
scbean/tools/parser.py
scbean/tools/plotting.py
scbean/tools/qqnorm.py
scbean/tools/transferLabel.py
scbean/tools/utils.py
tests/vipcca_test.py