Metadata-Version: 2.1
Name: seas
Version: 0.0.5
Summary: python Signal Extraction and Segmentation
Project-URL: Homepage, https://github.com/ackmanlab/pySEAS
Project-URL: Bug Tracker, https://github.com/ackmanlab/pySEAS/issues
Project-URL: Publication, https://doi.org/10.1371/journal.pcbi.1011085
Project-URL: Dsocumentation, https://pyseas.readthedocs.io/en/latest/
Author-email: Sydney Weiser <scweiser@ucsc.edu>, Brian Mullen <brmullen@ucsc.edu>
License-File: LICENSE
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3
Requires-Python: >=3.5
Requires-Dist: h5py
Requires-Dist: matplotlib
Requires-Dist: numpy
Requires-Dist: opencv-python
Requires-Dist: pyyaml
Requires-Dist: scikit-learn
Requires-Dist: scipy
Requires-Dist: tifffile
Requires-Dist: tk
Description-Content-Type: text/markdown

# pySEAS

python Signal Extraction and Segmentation

See the [ReadTheDocs](https://pyseas.readthedocs.io/en/master/modules.html) page to browse example experiment commands, documentation, and available function help.


**Publication describing functionality**: 
Weiser SC, Mullen BR, Ascencio D, Ackman JB (2023) Data-driven segmentation of cortical calcium dynamics. PLOS Computational Biology 19(5): e1011085. https://doi.org/10.1371/journal.pcbi.1011085


**Full datasets generated with this code**: Weiser, S, Mullen, BR, Ackman, J (2023), Data-driven segmentation of cortical calcium dynamics, Dryad, Dataset, https://doi.org/10.7291/D1N96W