Metadata-Version: 2.1
Name: myokit
Version: 1.33.8
Summary: A simple interface to cardiac cellular electrophysiology
Home-page: http://myokit.org
Author: Michael Clerx
Author-email: michael@myokit.org
License: BSD 3-clause license
Project-URL: Bug Tracker, https://github.com/MichaelClerx/myokit/issues
Project-URL: Documentation, http://docs.myokit.org
Project-URL: Source Code, https://github.com/MichaelClerx/myokit
Description: [![Ubuntu unit tests](https://github.com/MichaelClerx/myokit/workflows/Ubuntu%20unit%20tests/badge.svg)](https://github.com/MichaelClerx/myokit/actions?query=workflow%3A"Ubuntu+unit+tests")
        [![MacOS unit tests](https://github.com/MichaelClerx/myokit/workflows/MacOS%20unit%20tests/badge.svg)](https://github.com/MichaelClerx/myokit/actions?query=workflow%3A"MacOS+unit+tests")
        [![Windows unit tests](https://github.com/MichaelClerx/myokit/workflows/Windows%20unit%20tests/badge.svg)](https://github.com/MichaelClerx/myokit/actions?query=workflow%3A"Windows+unit+tests")
        [![Windows Miniconda test](https://github.com/MichaelClerx/myokit/workflows/Windows%20Miniconda%20test/badge.svg)](https://github.com/MichaelClerx/myokit/actions?query=workflow%3A"Windows+Miniconda+test")
        [![codecov](https://codecov.io/gh/myokit/myokit/branch/main/graph/badge.svg)](https://codecov.io/gh/myokit/myokit)
        [![Documentation Status](https://readthedocs.org/projects/myokit/badge/?version=latest)](https://myokit.readthedocs.io/?badge=latest)
        
        ![Myokit](http://myokit.org/static/img/logo.png)
        
        [Myokit](http://myokit.org) is an [open-source](https://github.com/MichaelClerx/myokit/blob/main/LICENSE.txt) Python-based toolkit that facilitates modeling and simulation of cardiac cellular electrophysiology.
        It's hosted on [GitHub](https://github.com/MichaelClerx/myokit/) and available on [PyPi](https://pypi.org/project/myokit/).
        For the latest documentation, see [myokit.readthedocs.io](https://myokit.readthedocs.io/).
        
        More information, including examples and an installation guide, is available on [myokit.org](http://myokit.org).
        A list of changes introduced in each Myokit release is provided in the [Changelog](https://github.com/MichaelClerx/myokit/blob/main/CHANGELOG.md).
        
        
        ## Install
        
        For full installation details (on linux, mac, or windows), please see [http://myokit.org/install](http://myokit.org/install).
        A shorter installation guide for experienced users is given below.
        
        To install Myokit, using PyQt5 for Myokit's GUI components, run:
        
            pip install myokit[pyqt]
            
        to use PySide2 instead, run:
            
            pip install myokit[pyside]
            
        If you're not planning to use the GUI components (for example to run simulations on a server), you can simply install with
        
            pip install myokit
        
        On Linux and Windows, start menu icons can be added by running
        
            python -m myokit icons
        
        To run single-cell simulations, [CVODES](https://computation.llnl.gov/projects/sundials/sundials-software) must be installed (but Windows users can skip this step, as binaries are included in the pip install).
        In addition, Myokit needs a working C/C++ compiler to be present on the system.
        
        Existing Myokit installations can be upgraded using
        
            pip install --upgrade myokit
        
        
        ## Quick-start guide
        
        After installation, to quickly test if Myokit works, type
        
            python -m myokit run example
            
        or simply
        
            myokit run example
            
        To open an IDE window, type
        
            myokit ide
        
        To see what else Myokit can do, type
        
            myokit -h
            
        
        ## Contributing to Myokit
        
        You can contribute to Myokit by [reporting issues](https://github.com/MichaelClerx/myokit/issues), but code contributions (bugfixes, new formats, new features etc.) are also very welcome!
        New features are best discussed in an issue before starting any implementation work, and guidelines for code style (and more) can be found in [CONTRIBUTING.md](https://github.com/MichaelClerx/myokit/blob/main/CONTRIBUTING.md).
        
        
        ## Citing Myokit
        
        If you use Myokit in your research, please cite it using the information in our [CITATION file](https://github.com/MichaelClerx/myokit/blob/main/CITATION).
        
        
        ## Research notice
        
        Please note that this repository is participating in a study into sustainability of open source projects.
        Data will be gathered about this repository for approximately the next 12 months, starting from June 8th 2021.
        
        Data collected will include number of contributors, number of PRs, time taken to close/merge these PRs, and issues closed.
        
        For more information, please visit [the informational page](https://sustainable-open-science-and-software.github.io/) or download the [participant information sheet](https://sustainable-open-science-and-software.github.io/assets/PIS_sustainable_software.pdf).
        
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Chemistry
Classifier: Topic :: Scientific/Engineering :: Mathematics
Classifier: Topic :: Scientific/Engineering :: Medical Science Apps.
Classifier: Topic :: Scientific/Engineering :: Physics
Description-Content-Type: text/markdown
Provides-Extra: docs
Provides-Extra: dev
Provides-Extra: optional
Provides-Extra: gui
Provides-Extra: pyqt
Provides-Extra: pyside
License-File: LICENSE.txt
